DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
AATST
Uniprot ID:
Q9Y446
Source protein:
Plakophilin-3
Source gene:
PKP3
Class:
DEG_SPOP_SBC_1
Location:
205:209
E3 ligase:
SPOP
DEGRON score:
0.9186
ASA_SCORE:
58.08
COIL:
0.6802
CONS_SCORE:
0.6145
DSS_SCORE:
0.3314
HELIX:
0.2892
FCONS_SCORE:
0.95
RIG_SCORE:
0.7675
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A205T
TCGA-D7-A6EY
STAD
TCGA
AATST
DEG_SPOP_SBC_1
0.7139
p.A205T
DO50118
STAD
ICGC
AATST
DEG_SPOP_SBC_1
0.7139
p.P204H
TCGA-HR-A2OH
SKCM
TCGA
AATST
DEG_SPOP_SBC_1
0.3056
p.P204H
DO37774
SKCM
ICGC
AATST
DEG_SPOP_SBC_1
0.3056
p.Y195C
TCGA-O2-A52N
LUSC
TCGA
AATST
DEG_SPOP_SBC_1
0.5
p.Y195C
DO219217
LUSC
ICGC
AATST
DEG_SPOP_SBC_1
0.5
p.R217H
DO228893
LICA
ICGC
AATST
DEG_SPOP_SBC_1
0.1111
p.A206T
DO220877
MELA
ICGC
AATST
DEG_SPOP_SBC_1
0.6028
p.Q201H
DO229148
THCA
ICGC
AATST
DEG_SPOP_SBC_1
0.2222
p.L202M
DO229221
THCA
ICGC
AATST
DEG_SPOP_SBC_1
0.25
p.A206S
SIDM00094
Kidney Carcinoma
GDSC
AATST
DEG_SPOP_SBC_1
0.6477
p.A206S
ACH-002199
Kidney Cancer
CCLE
AATST
DEG_SPOP_SBC_1
0.6477
p.A206S
SN12C
kidney
COSMIC
AATST
DEG_SPOP_SBC_1
0.6477
p.A205V
SIDM00220
Ovarian Carcinoma
GDSC
AATST
DEG_SPOP_SBC_1
0.5825
p.A205V
ACH-000962
Ovarian Cancer
CCLE
AATST
DEG_SPOP_SBC_1
0.5825
p.A205V
ACH-001145
Ovarian Cancer
CCLE
AATST
DEG_SPOP_SBC_1
0.5825
p.A205V
OC-314
ovary
COSMIC
AATST
DEG_SPOP_SBC_1
0.5825
Drug responses associated with PKP3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AATST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75056
Syndecan-3
DEG_SPOP_SBC_1
167:171
AATST
SPOP
0.9748
More...
P35658
Nuclear pore complex protein Nup214
DEG_SPOP_SBC_1
594:598
AATST
SPOP
0.737
More...
P35658
Nuclear pore complex protein Nup214
DEG_SPOP_SBC_1
1401:1405
AATST
SPOP
0.9715
More...
Q05209
Tyrosine-protein phosphatase non-receptor type 12
DEG_SPOP_SBC_1
633:637
AATST
SPOP
0.9815
More...
Q4KMQ1
Taperin
DEG_SPOP_SBC_1
289:293
AATST
SPOP
0.9965
More...
Q6W2J9
BCL-6 corepressor
DEG_SPOP_SBC_1
104:108
AATST
SPOP
0.9528
More...
Q86Z02
Homeodomain-interacting protein kinase 1
DEG_SPOP_SBC_1
95:99
AATST
SPOP
0.9812
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
11752:11756
AATST
SPOP
0.9954
More...
Q96BD5
PHD finger protein 21A
DEG_SPOP_SBC_1
655:659
AATST
SPOP
0.9845
More...
Q96FS4
Signal-induced proliferation-associated protein 1
DEG_SPOP_SBC_1
82:86
AATST
SPOP
0.9975
More...
Q9BVL2
Nucleoporin p58/p45
DEG_SPOP_SBC_1
206:210
AATST
SPOP
0.9912
More...
Q9NZN1
Interleukin-1 receptor accessory protein-like 1
DEG_SPOP_SBC_1
594:598
AATST
SPOP
0.6429
More...
Q9ULV3
Cip1-interacting zinc finger protein
DEG_SPOP_SBC_1
581:585
AATST
SPOP
0.9621
More...
Q9Y446
Plakophilin-3
DEG_SPOP_SBC_1
205:209
AATST
SPOP
0.9186
More...
Q9Y6Y8
SEC23-interacting protein
DEG_SPOP_SBC_1
718:722
AATST
SPOP
0.6755
More...
Q8N3X1
Formin-binding protein 4
DEG_SPOP_SBC_1
181:185
AATST
SPOP
0.7939
More...
Q86XN7
Proline and serine-rich protein 1
DEG_SPOP_SBC_1
732:736
AATST
SPOP
0.9872
More...