DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
AGTTT
Uniprot ID:
P49840
Source protein:
Glycogen synthase kinase-3 alpha
Source gene:
GSK3A
Class:
DEG_SPOP_SBC_1
Location:
449:453
E3 ligase:
SPOP
DEGRON score:
0.9893
ASA_SCORE:
74.5
COIL:
0.9044
CONS_SCORE:
0.1929
DSS_SCORE:
0.6007
HELIX:
0.0336
FCONS_SCORE:
0.5656
RIG_SCORE:
0.632
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T452N
DO229009
LICA
ICGC
AGTTT
DEG_SPOP_SBC_1
0.7055
p.L454I
SIDM01113
Other Sarcomas
GDSC
AGTTT
DEG_SPOP_SBC_1
0.3056
p.L454I
ACH-000939
Sarcoma
CCLE
AGTTT
DEG_SPOP_SBC_1
0.3056
p.L454I
SK-UT-1
soft_tissue
COSMIC
AGTTT
DEG_SPOP_SBC_1
0.3056
Drug responses associated with GSK3A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
SIDM00533
PAAD|pancreas
p.G325W (No)
GDSC
CHIR-99021
36.1153
SIDM00533
PAAD|pancreas
p.G325W (No)
GDSC
SB216763
157.5582
SIDM00533
PAAD|pancreas
p.G325W (No)
GDSC
CHIR-99021
39.5496
SIDM00839
COREAD|large_intestine
p.G13fs*2 (No)
GDSC
CHIR-99021
5.037
SIDM00839
COREAD|large_intestine
p.G13fs*2 (No)
GDSC
SB216763
12.4859
SIDM00839
COREAD|large_intestine
p.G13fs*2 (No)
GDSC
CHIR-99021
23.5989
SIDM00839
COREAD|large_intestine
p.G13fs*2 (No)
GDSC
SB216763
50.56
SIDM00325
ESCA|oesophagus
p.I235M (No)
GDSC
CHIR-99021
21.8539
SIDM00325
ESCA|oesophagus
p.I235M (No)
GDSC
SB216763
142.369
SIDM00325
ESCA|oesophagus
p.I235M (No)
GDSC
CHIR-99021
102.9934
SIDM00951
LAML|acute_myeloid_leukaemia
p.R230H (No)
GDSC
CHIR-99021
4.2996
SIDM00951
LAML|acute_myeloid_leukaemia
p.R230H (No)
GDSC
SB216763
22.9938
SIDM00951
LAML|acute_myeloid_leukaemia
p.R230H (No)
GDSC
CHIR-99021
5.4189
SIDM00826
COREAD|large_intestine
p.F292L (No)
GDSC
CHIR-99021
5.6011
SIDM00826
COREAD|large_intestine
p.F292L (No)
GDSC
SB216763
58.6902
SIDM00826
COREAD|large_intestine
p.F292L (No)
GDSC
CHIR-99021
90.4119
SIDM00826
COREAD|large_intestine
p.F292L (No)
GDSC
SB216763
23.223
SIDM00494
LUAD|lung_NSCLC_adenocarcinoma
p.D255E (No)
GDSC
CHIR-99021
50.0017
SIDM00494
LUAD|lung_NSCLC_adenocarcinoma
p.D255E (No)
GDSC
SB216763
196.9607
SIDM00494
LUAD|lung_NSCLC_adenocarcinoma
p.D255E (No)
GDSC
CHIR-99021
109.7139
SIDM00499
PRAD|prostate
p.K186delK (No)
GDSC
CHIR-99021
37.0537
SIDM00499
PRAD|prostate
p.K186delK (No)
GDSC
SB216763
159.546
SIDM00499
PRAD|prostate
p.K186delK (No)
GDSC
CHIR-99021
25.3759
SIDM00516
SKCM|melanoma
p.L379F (No)
GDSC
CHIR-99021
13.5512
SIDM00516
SKCM|melanoma
p.L379F (No)
GDSC
SB216763
74.9929
SIDM00516
SKCM|melanoma
p.L379F (No)
GDSC
CHIR-99021
127.0411
SIDM00112
KIRC|kidney
p.A378T (No)
GDSC
CHIR-99021
18.8907
SIDM00112
KIRC|kidney
p.A378T (No)
GDSC
SB216763
114.0497
SIDM00112
KIRC|kidney
p.A378T (No)
GDSC
CHIR-99021
2.4743
SIDM00216
COREAD|large_intestine
p.R272* (No)
GDSC
SB216763
57.37
SIDM00216
COREAD|large_intestine
p.V133M (No)
GDSC
SB216763
57.37
SIDM00596
UCEC|endometrium
p.R165H (No)
GDSC
CHIR-99021
16.1597
SIDM00596
UCEC|endometrium
p.R165H (No)
GDSC
SB216763
59.065
SIDM00596
UCEC|endometrium
p.R165H (No)
GDSC
CHIR-99021
47.1475
SIDM01084
UNCLASSIFIED|osteosarcoma
p.T201K (No)
GDSC
CHIR-99021
42.8405
SIDM01084
UNCLASSIFIED|osteosarcoma
p.T201K (No)
GDSC
SB216763
188.3581
SIDM01084
UNCLASSIFIED|osteosarcoma
p.T201K (No)
GDSC
CHIR-99021
363.777
SIDM00329
UNCLASSIFIED|Hodgkin_lymphoma
p.S324G (No)
GDSC
CHIR-99021
17.9791
SIDM00329
UNCLASSIFIED|Hodgkin_lymphoma
p.S324G (No)
GDSC
SB216763
19.0186
SIDM00329
UNCLASSIFIED|Hodgkin_lymphoma
p.S324G (No)
GDSC
CHIR-99021
34.0234
SIDM00789
COREAD|large_intestine
p.A118D (No)
GDSC
CHIR-99021
19.8132
SIDM00789
COREAD|large_intestine
p.A118D (No)
GDSC
SB216763
160.3627
SIDM00789
COREAD|large_intestine
p.A118D (No)
GDSC
CHIR-99021
141.9781
SIDM00789
COREAD|large_intestine
p.A118D (No)
GDSC
SB216763
92.626
SIDM00142
UCEC|endometrium
p.N350fs*11 (No)
GDSC
CHIR-99021
43.3299
SIDM00142
UCEC|endometrium
p.N350fs*11 (No)
GDSC
SB216763
39.2222
SIDM00142
UCEC|endometrium
p.N350fs*11 (No)
GDSC
CHIR-99021
155.2844
SIDM01113
UNCLASSIFIED|soft_tissue_other
p.L454I (Yes)
GDSC
CHIR-99021
9.3856
SIDM01113
UNCLASSIFIED|soft_tissue_other
p.L454I (Yes)
GDSC
SB216763
83.7828
SIDM01113
UNCLASSIFIED|soft_tissue_other
p.L454I (Yes)
GDSC
CHIR-99021
21.4215
SIDM01113
UNCLASSIFIED|soft_tissue_other
p.V104I (No)
GDSC
CHIR-99021
9.3856
SIDM01113
UNCLASSIFIED|soft_tissue_other
p.V104I (No)
GDSC
SB216763
83.7828
SIDM01113
UNCLASSIFIED|soft_tissue_other
p.V104I (No)
GDSC
CHIR-99021
21.4215
SIDM00390
UNCLASSIFIED|anaplastic_large_cell_lymphoma
p.Q358* (No)
GDSC
CHIR-99021
8.1835
SIDM00118
COREAD|large_intestine
p.F130V (No)
GDSC
CHIR-99021
13.1037
SIDM00118
COREAD|large_intestine
p.F130V (No)
GDSC
SB216763
113.6379
SIDM00118
COREAD|large_intestine
p.F130V (No)
GDSC
CHIR-99021
88.187
SIDM00118
COREAD|large_intestine
p.F130V (No)
GDSC
SB216763
209.26
All proteins holding degron of AGTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P49840
Glycogen synthase kinase-3 alpha
DEG_SPOP_SBC_1
449:453
AGTTT
SPOP
0.9893
More...
P51610
Host cell factor 1
DEG_SPOP_SBC_1
1597:1601
AGTTT
SPOP
0.9677
More...
P52948
Nuclear pore complex protein Nup98-Nup96
DEG_SPOP_SBC_1
221:225
AGTTT
SPOP
0.9799
More...
Q08708
CMRF35-like molecule 6
DEG_SPOP_SBC_1
134:138
AGTTT
SPOP
0.9394
More...
Q659A1
Little elongation complex subunit 2
DEG_SPOP_SBC_1
437:441
AGTTT
SPOP
0.9896
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
3464:3468
AGTTT
SPOP
0.9981
More...
Q9UJD0
Regulating synaptic membrane exocytosis protein 3
DEG_SPOP_SBC_1
37:41
AGTTT
SPOP
0.9961
More...
Q9Y2H1
Serine/threonine-protein kinase 38-like
DEG_SPOP_SBC_1
5:9
AGTTT
SPOP
0.9978
More...
Q9Y6W6
Dual specificity protein phosphatase 10
DEG_SPOP_SBC_1
99:103
AGTTT
SPOP
0.9358
More...
Q03828
Homeobox even-skipped homolog protein 2
DEG_SPOP_SBC_1
151:155
AGTTT
SPOP
0.9471
More...
O43247
Testis-expressed protein 33
DEG_SPOP_SBC_1
7:11
AGTTT
SPOP
0.7629
More...
Q5HYC2
Uncharacterized protein KIAA2026
DEG_SPOP_SBC_1
1337:1341
AGTTT
SPOP
0.9403
More...