DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AGTTT
Uniprot ID:
Q9UJD0
Source protein:
Regulating synaptic membrane exocytosis protein 3
Source gene:
RIMS3
Class:
DEG_SPOP_SBC_1
Location:
37:41
E3 ligase:
SPOP
DEGRON score:
0.9961
ASA_SCORE:
78.12
COIL:
0.8744
CONS_SCORE:
0.4991
DSS_SCORE:
0.569
HELIX:
0.099
FCONS_SCORE:
1.0405
RIG_SCORE:
0.6782
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A42T
TCGA-32-1977
GBM
TCGA
AGTTT
DEG_SPOP_SBC_1
0.3056
p.A42T
TCGA-AA-A010
COAD
TCGA
AGTTT
DEG_SPOP_SBC_1
0.3056
p.A42T
TCGA-CN-4730
HNSC
TCGA
AGTTT
DEG_SPOP_SBC_1
0.3056
p.A42T
DO12076
GBM
ICGC
AGTTT
DEG_SPOP_SBC_1
0.3056
p.A42T
DO14234
HNSC
ICGC
AGTTT
DEG_SPOP_SBC_1
0.3056
p.R45W
TCGA-A2-A4S1
BRCA
TCGA
AGTTT
DEG_SPOP_SBC_1
0.2222
p.R45W
DO44216
BRCA
ICGC
AGTTT
DEG_SPOP_SBC_1
0.2222
p.G38W
TCGA-D3-A3CB
SKCM
TCGA
AGTTT
DEG_SPOP_SBC_1
0.6714
p.G38W
DO47386
SKCM
ICGC
AGTTT
DEG_SPOP_SBC_1
0.6714
p.Q31K
TCGA-D3-A3CE
SKCM
TCGA
AGTTT
DEG_SPOP_SBC_1
0.1667
p.Q31K
DO37405
SKCM
ICGC
AGTTT
DEG_SPOP_SBC_1
0.1667
p.G29R
DO233270
GACA
ICGC
AGTTT
DEG_SPOP_SBC_1
0.1111
p.A33D
DO229018
LICA
ICGC
AGTTT
DEG_SPOP_SBC_1
0.2222
p.G34W
SIDM00664
Pancreatic Carcinoma
GDSC
AGTTT
DEG_SPOP_SBC_1
0.25
p.G34W
ACH-000178
Pancreatic Cancer
CCLE
AGTTT
DEG_SPOP_SBC_1
0.25
p.A37V
SIDM00142
Endometrial Carcinoma
GDSC
AGTTT
DEG_SPOP_SBC_1
0.5825
p.A37V
ACH-000864
Endometrial/Uterine Cancer
CCLE
AGTTT
DEG_SPOP_SBC_1
0.5825
p.A37V
COLO-684
endometrium
COSMIC
AGTTT
DEG_SPOP_SBC_1
0.5825
p.G34R
ACH-000918
Leukemia
CCLE
AGTTT
DEG_SPOP_SBC_1
0.25
Drug responses associated with RIMS3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AGTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P49840
Glycogen synthase kinase-3 alpha
DEG_SPOP_SBC_1
449:453
AGTTT
SPOP
0.9893
More...
P51610
Host cell factor 1
DEG_SPOP_SBC_1
1597:1601
AGTTT
SPOP
0.9677
More...
P52948
Nuclear pore complex protein Nup98-Nup96
DEG_SPOP_SBC_1
221:225
AGTTT
SPOP
0.9799
More...
Q08708
CMRF35-like molecule 6
DEG_SPOP_SBC_1
134:138
AGTTT
SPOP
0.9394
More...
Q659A1
Little elongation complex subunit 2
DEG_SPOP_SBC_1
437:441
AGTTT
SPOP
0.9896
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
3464:3468
AGTTT
SPOP
0.9981
More...
Q9UJD0
Regulating synaptic membrane exocytosis protein 3
DEG_SPOP_SBC_1
37:41
AGTTT
SPOP
0.9961
More...
Q9Y2H1
Serine/threonine-protein kinase 38-like
DEG_SPOP_SBC_1
5:9
AGTTT
SPOP
0.9978
More...
Q9Y6W6
Dual specificity protein phosphatase 10
DEG_SPOP_SBC_1
99:103
AGTTT
SPOP
0.9358
More...
Q03828
Homeobox even-skipped homolog protein 2
DEG_SPOP_SBC_1
151:155
AGTTT
SPOP
0.9471
More...
O43247
Testis-expressed protein 33
DEG_SPOP_SBC_1
7:11
AGTTT
SPOP
0.7629
More...
Q5HYC2
Uncharacterized protein KIAA2026
DEG_SPOP_SBC_1
1337:1341
AGTTT
SPOP
0.9403
More...