DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AGTTT
Uniprot ID:
Q08708
Source protein:
CMRF35-like molecule 6
Source gene:
CD300C
Class:
DEG_SPOP_SBC_1
Location:
134:138
E3 ligase:
SPOP
DEGRON score:
0.9394
ASA_SCORE:
63.2
COIL:
0.876
CONS_SCORE:
0.278
DSS_SCORE:
0.5204
HELIX:
0.044
FCONS_SCORE:
0.7038
RIG_SCORE:
0.675
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A139V
TCGA-AA-3977
COAD
TCGA
AGTTT
DEG_SPOP_SBC_1
0.3056
p.A139V
DO8730
COAD
ICGC
AGTTT
DEG_SPOP_SBC_1
0.3056
p.P142S
TCGA-BF-AAP2
SKCM
TCGA
AGTTT
DEG_SPOP_SBC_1
0.2222
p.P142S
DO219466
SKCM
ICGC
AGTTT
DEG_SPOP_SBC_1
0.2222
p.P133Q
TCGA-BJ-A2N8
THCA
TCGA
AGTTT
DEG_SPOP_SBC_1
0.3056
p.P133Q
DO48068
THCA
ICGC
AGTTT
DEG_SPOP_SBC_1
0.3056
p.P133L
TCGA-BR-8078
STAD
TCGA
AGTTT
DEG_SPOP_SBC_1
0.3056
p.P133L
DO222815
BTCA
ICGC
AGTTT
DEG_SPOP_SBC_1
0.3056
p.P133L
DO38288
STAD
ICGC
AGTTT
DEG_SPOP_SBC_1
0.3056
p.E128Q
TCGA-C5-A7X3
CESC
TCGA
AGTTT
DEG_SPOP_SBC_1
0.1667
p.E128Q
DO49893
CESC
ICGC
AGTTT
DEG_SPOP_SBC_1
0.1667
p.P142L
TCGA-DA-A3F8
SKCM
TCGA
AGTTT
DEG_SPOP_SBC_1
0.2222
p.P142L
DO37418
SKCM
ICGC
AGTTT
DEG_SPOP_SBC_1
0.2222
p.S140F
TCGA-EB-A5UN
SKCM
TCGA
AGTTT
DEG_SPOP_SBC_1
0.2778
p.S140F
DO47267
SKCM
ICGC
AGTTT
DEG_SPOP_SBC_1
0.2778
p.A134V
TCGA-EI-6882
READ
TCGA
AGTTT
DEG_SPOP_SBC_1
0.5825
p.A134V
DO36531
READ
ICGC
AGTTT
DEG_SPOP_SBC_1
0.5825
p.A139T
TCGA-FI-A2D5
UCEC
TCGA
AGTTT
DEG_SPOP_SBC_1
0.3056
p.A139T
DO41331
UCEC
ICGC
AGTTT
DEG_SPOP_SBC_1
0.3056
p.S141R
TCGA-WB-A817
PCPG
TCGA
AGTTT
DEG_SPOP_SBC_1
0.25
p.S141R
SIDM00606
Squamous Cell Lung Carcinoma
GDSC
AGTTT
DEG_SPOP_SBC_1
0.25
p.S141R
ACH-000858
Lung Cancer
CCLE
AGTTT
DEG_SPOP_SBC_1
0.25
p.S141R
KNS-62
lung
COSMIC
AGTTT
DEG_SPOP_SBC_1
0.25
p.A139D
DO229019
LICA
ICGC
AGTTT
DEG_SPOP_SBC_1
0.3056
p.I124V
DO229253
THCA
ICGC
AGTTT
DEG_SPOP_SBC_1
0.0556
p.S141G
DO229227
THCA
ICGC
AGTTT
DEG_SPOP_SBC_1
0.25
p.V127A
SIDM00571
Pancreatic Carcinoma
GDSC
AGTTT
DEG_SPOP_SBC_1
0.1389
p.V127A
ACH-000108
Pancreatic Cancer
CCLE
AGTTT
DEG_SPOP_SBC_1
0.1389
p.V127A
KP-3
pancreas
COSMIC
AGTTT
DEG_SPOP_SBC_1
0.1389
p.Q143H
SIDM00118
Colorectal Carcinoma
GDSC
AGTTT
DEG_SPOP_SBC_1
0.1944
p.Q143H
ACH-001081
Colon/Colorectal Cancer
CCLE
AGTTT
DEG_SPOP_SBC_1
0.1944
p.Q143H
HCC2998
large_intestine
COSMIC
AGTTT
DEG_SPOP_SBC_1
0.1944
Drug responses associated with CD300C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AGTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P49840
Glycogen synthase kinase-3 alpha
DEG_SPOP_SBC_1
449:453
AGTTT
SPOP
0.9893
More...
P51610
Host cell factor 1
DEG_SPOP_SBC_1
1597:1601
AGTTT
SPOP
0.9677
More...
P52948
Nuclear pore complex protein Nup98-Nup96
DEG_SPOP_SBC_1
221:225
AGTTT
SPOP
0.9799
More...
Q08708
CMRF35-like molecule 6
DEG_SPOP_SBC_1
134:138
AGTTT
SPOP
0.9394
More...
Q659A1
Little elongation complex subunit 2
DEG_SPOP_SBC_1
437:441
AGTTT
SPOP
0.9896
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
3464:3468
AGTTT
SPOP
0.9981
More...
Q9UJD0
Regulating synaptic membrane exocytosis protein 3
DEG_SPOP_SBC_1
37:41
AGTTT
SPOP
0.9961
More...
Q9Y2H1
Serine/threonine-protein kinase 38-like
DEG_SPOP_SBC_1
5:9
AGTTT
SPOP
0.9978
More...
Q9Y6W6
Dual specificity protein phosphatase 10
DEG_SPOP_SBC_1
99:103
AGTTT
SPOP
0.9358
More...
Q03828
Homeobox even-skipped homolog protein 2
DEG_SPOP_SBC_1
151:155
AGTTT
SPOP
0.9471
More...
O43247
Testis-expressed protein 33
DEG_SPOP_SBC_1
7:11
AGTTT
SPOP
0.7629
More...
Q5HYC2
Uncharacterized protein KIAA2026
DEG_SPOP_SBC_1
1337:1341
AGTTT
SPOP
0.9403
More...