DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
AGTTT
Uniprot ID:
P52948
Source protein:
Nuclear pore complex protein Nup98-Nup96
Source gene:
NUP98
Class:
DEG_SPOP_SBC_1
Location:
221:225
E3 ligase:
SPOP
DEGRON score:
0.9799
ASA_SCORE:
55.12
COIL:
0.7666
CONS_SCORE:
0.4104
DSS_SCORE:
0.5833
HELIX:
0.0436
FCONS_SCORE:
0.9685
RIG_SCORE:
0.6742
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N217K
DO229022
LICA
ICGC
AGTTT
DEG_SPOP_SBC_1
0.2222
p.T225N
DO229045
LICA
ICGC
AGTTT
DEG_SPOP_SBC_1
0.7055
p.G214A
DO229211
THCA
ICGC
AGTTT
DEG_SPOP_SBC_1
0.1389
p.G214S
ACH-000982
Colon/Colorectal Cancer
CCLE
AGTTT
DEG_SPOP_SBC_1
0.1389
Drug responses associated with NUP98 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AGTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P49840
Glycogen synthase kinase-3 alpha
DEG_SPOP_SBC_1
449:453
AGTTT
SPOP
0.9893
More...
P51610
Host cell factor 1
DEG_SPOP_SBC_1
1597:1601
AGTTT
SPOP
0.9677
More...
P52948
Nuclear pore complex protein Nup98-Nup96
DEG_SPOP_SBC_1
221:225
AGTTT
SPOP
0.9799
More...
Q08708
CMRF35-like molecule 6
DEG_SPOP_SBC_1
134:138
AGTTT
SPOP
0.9394
More...
Q659A1
Little elongation complex subunit 2
DEG_SPOP_SBC_1
437:441
AGTTT
SPOP
0.9896
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
3464:3468
AGTTT
SPOP
0.9981
More...
Q9UJD0
Regulating synaptic membrane exocytosis protein 3
DEG_SPOP_SBC_1
37:41
AGTTT
SPOP
0.9961
More...
Q9Y2H1
Serine/threonine-protein kinase 38-like
DEG_SPOP_SBC_1
5:9
AGTTT
SPOP
0.9978
More...
Q9Y6W6
Dual specificity protein phosphatase 10
DEG_SPOP_SBC_1
99:103
AGTTT
SPOP
0.9358
More...
Q03828
Homeobox even-skipped homolog protein 2
DEG_SPOP_SBC_1
151:155
AGTTT
SPOP
0.9471
More...
O43247
Testis-expressed protein 33
DEG_SPOP_SBC_1
7:11
AGTTT
SPOP
0.7629
More...
Q5HYC2
Uncharacterized protein KIAA2026
DEG_SPOP_SBC_1
1337:1341
AGTTT
SPOP
0.9403
More...