DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AVTTT
Uniprot ID:
A2A368
Source protein:
Melanoma-associated antigen B16
Source gene:
MAGEB16
Class:
DEG_SPOP_SBC_1
Location:
74:78
E3 ligase:
SPOP
DEGRON score:
0.5345
ASA_SCORE:
85.1
COIL:
0.8784
CONS_SCORE:
0.2545
DSS_SCORE:
0.5666
HELIX:
0.0562
FCONS_SCORE:
0.8674
RIG_SCORE:
0.6539
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S72Y
TCGA-06-5416
GBM
TCGA
AVTTT
DEG_SPOP_SBC_1
0.2778
p.S72Y
DO10880
GBM
ICGC
AVTTT
DEG_SPOP_SBC_1
0.2778
p.Q66H
TCGA-85-A4JC
LUSC
TCGA
AVTTT
DEG_SPOP_SBC_1
0.1111
p.Q66H
DO45429
LUSC
ICGC
AVTTT
DEG_SPOP_SBC_1
0.1111
p.S88N
TCGA-D3-A5GO
SKCM
TCGA
AVTTT
DEG_SPOP_SBC_1
0.0556
p.S88N
DO47419
SKCM
ICGC
AVTTT
DEG_SPOP_SBC_1
0.0556
p.E82K
TCGA-E7-A7PW
BLCA
TCGA
AVTTT
DEG_SPOP_SBC_1
0.2222
p.E82K
DO219017
BLCA
ICGC
AVTTT
DEG_SPOP_SBC_1
0.2222
p.V64I
TCGA-OL-A5DA
BRCA
TCGA
AVTTT
DEG_SPOP_SBC_1
0.0556
p.V64I
DO44121
BRCA
ICGC
AVTTT
DEG_SPOP_SBC_1
0.0556
p.C69F
TCGA-X7-A8M3
THYM
TCGA
AVTTT
DEG_SPOP_SBC_1
0.1944
p.V75I
DO227975
COCA
ICGC
AVTTT
DEG_SPOP_SBC_1
0.5965
p.V75I
DO233764
GACA
ICGC
AVTTT
DEG_SPOP_SBC_1
0.5965
p.V75I
SIDM00186
Kidney Carcinoma
GDSC
AVTTT
DEG_SPOP_SBC_1
0.5965
p.V75I
SIDM00858
Osteosarcoma
GDSC
AVTTT
DEG_SPOP_SBC_1
0.5965
p.V75I
SIDM01157
Other Solid Cancers
GDSC
AVTTT
DEG_SPOP_SBC_1
0.5965
p.V75I
SIDM01651
Non-Cancerous
GDSC
AVTTT
DEG_SPOP_SBC_1
0.5965
p.T76I
DO231984
LICA
ICGC
AVTTT
DEG_SPOP_SBC_1
0.7078
p.A74V
DO50970
LICA
ICGC
AVTTT
DEG_SPOP_SBC_1
0.5825
p.A74V
SIDM01679
Small Cell Lung Carcinoma
GDSC
AVTTT
DEG_SPOP_SBC_1
0.5825
p.A74V
ACH-000523
Lung Cancer
CCLE
AVTTT
DEG_SPOP_SBC_1
0.5825
p.S67N
DO52361
LUSC
ICGC
AVTTT
DEG_SPOP_SBC_1
0.1389
p.P65S
DO220857
MELA
ICGC
AVTTT
DEG_SPOP_SBC_1
0.0833
p.P65S
DO220905
MELA
ICGC
AVTTT
DEG_SPOP_SBC_1
0.0833
p.S83Y
SIDM01588
Endometrial Carcinoma
GDSC
AVTTT
DEG_SPOP_SBC_1
0.1944
p.S83Y
ACH-000993
Endometrial/Uterine Cancer
CCLE
AVTTT
DEG_SPOP_SBC_1
0.1944
p.A86D
ACH-000208
Brain Cancer
CCLE
AVTTT
DEG_SPOP_SBC_1
0.1111
Drug responses associated with MAGEB16 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AVTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15054
Lysine-specific demethylase 6B
DEG_SPOP_SBC_1
750:754
AVTTT
SPOP
0.963
More...
O95104
SR-related and CTD-associated factor 4
DEG_SPOP_SBC_1
284:288
AVTTT
SPOP
0.5941
More...
P52756
RNA-binding protein 5
DEG_SPOP_SBC_1
400:404
AVTTT
SPOP
0.6447
More...
Q6Q4G3
Aminopeptidase Q
DEG_SPOP_SBC_1
79:83
AVTTT
SPOP
0.9845
More...
Q86SE5
RNA-binding Raly-like protein
DEG_SPOP_SBC_1
162:166
AVTTT
SPOP
0.9953
More...
Q8IWI9
MAX gene-associated protein
DEG_SPOP_SBC_1
1596:1600
AVTTT
SPOP
0.5077
More...
Q9H3R2
Mucin-13
DEG_SPOP_SBC_1
27:31
AVTTT
SPOP
0.8418
More...
Q9NSU2
Three-prime repair exonuclease 1
DEG_SPOP_SBC_1
247:251
AVTTT
SPOP
0.9952
More...
Q9UKJ1
Paired immunoglobulin-like type 2 receptor alpha
DEG_SPOP_SBC_1
152:156
AVTTT
SPOP
0.5634
More...
Q9Y2H9
Microtubule-associated serine/threonine-protein kinase 1
DEG_SPOP_SBC_1
1048:1052
AVTTT
SPOP
0.8655
More...
Q9UKJ0
Paired immunoglobulin-like type 2 receptor beta
DEG_SPOP_SBC_1
152:156
AVTTT
SPOP
0.7899
More...
A2A368
Melanoma-associated antigen B16
DEG_SPOP_SBC_1
74:78
AVTTT
SPOP
0.5345
More...