DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AVTTT
Uniprot ID:
Q9UKJ1
Source protein:
Paired immunoglobulin-like type 2 receptor alpha
Source gene:
PILRA
Class:
DEG_SPOP_SBC_1
Location:
152:156
E3 ligase:
SPOP
DEGRON score:
0.5634
ASA_SCORE:
69.74
COIL:
0.6882
CONS_SCORE:
0.6186
DSS_SCORE:
0.5434
HELIX:
0.018
FCONS_SCORE:
1.1393
RIG_SCORE:
0.7852
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E143K
TCGA-AA-3864
COAD
TCGA
AVTTT
DEG_SPOP_SBC_1
0.0833
p.E143K
DO8490
COAD
ICGC
AVTTT
DEG_SPOP_SBC_1
0.0833
p.T154M
TCGA-BT-A20N
BLCA
TCGA
AVTTT
DEG_SPOP_SBC_1
0.7423
p.T154M
DO550
BLCA
ICGC
AVTTT
DEG_SPOP_SBC_1
0.7423
p.R163I
DO228952
LICA
ICGC
AVTTT
DEG_SPOP_SBC_1
0.1389
p.G144V
DO228978
LICA
ICGC
AVTTT
DEG_SPOP_SBC_1
0.1111
p.S160I
DO229035
LICA
ICGC
AVTTT
DEG_SPOP_SBC_1
0.2222
p.G152E
DO50303
SKCM
ICGC
AVTTT
DEG_SPOP_SBC_1
0.7199
p.R159G
DO51259
SKCM
ICGC
AVTTT
DEG_SPOP_SBC_1
0.25
p.Q158H
ACH-002834
Bone Cancer
CCLE
AVTTT
DEG_SPOP_SBC_1
0.2778
p.G152D
YH-13
central_nervous_system
COSMIC
AVTTT
DEG_SPOP_SBC_1
0.7198
p.E164K
SK-MEL-5
skin
COSMIC
AVTTT
DEG_SPOP_SBC_1
0.1111
Drug responses associated with PILRA mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AVTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15054
Lysine-specific demethylase 6B
DEG_SPOP_SBC_1
750:754
AVTTT
SPOP
0.963
More...
O95104
SR-related and CTD-associated factor 4
DEG_SPOP_SBC_1
284:288
AVTTT
SPOP
0.5941
More...
P52756
RNA-binding protein 5
DEG_SPOP_SBC_1
400:404
AVTTT
SPOP
0.6447
More...
Q6Q4G3
Aminopeptidase Q
DEG_SPOP_SBC_1
79:83
AVTTT
SPOP
0.9845
More...
Q86SE5
RNA-binding Raly-like protein
DEG_SPOP_SBC_1
162:166
AVTTT
SPOP
0.9953
More...
Q8IWI9
MAX gene-associated protein
DEG_SPOP_SBC_1
1596:1600
AVTTT
SPOP
0.5077
More...
Q9H3R2
Mucin-13
DEG_SPOP_SBC_1
27:31
AVTTT
SPOP
0.8418
More...
Q9NSU2
Three-prime repair exonuclease 1
DEG_SPOP_SBC_1
247:251
AVTTT
SPOP
0.9952
More...
Q9UKJ1
Paired immunoglobulin-like type 2 receptor alpha
DEG_SPOP_SBC_1
152:156
AVTTT
SPOP
0.5634
More...
Q9Y2H9
Microtubule-associated serine/threonine-protein kinase 1
DEG_SPOP_SBC_1
1048:1052
AVTTT
SPOP
0.8655
More...
Q9UKJ0
Paired immunoglobulin-like type 2 receptor beta
DEG_SPOP_SBC_1
152:156
AVTTT
SPOP
0.7899
More...
A2A368
Melanoma-associated antigen B16
DEG_SPOP_SBC_1
74:78
AVTTT
SPOP
0.5345
More...