DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
AVTTT
Uniprot ID:
Q9UKJ0
Source protein:
Paired immunoglobulin-like type 2 receptor beta
Source gene:
PILRB
Class:
DEG_SPOP_SBC_1
Location:
152:156
E3 ligase:
SPOP
DEGRON score:
0.7899
ASA_SCORE:
83
COIL:
0.84
CONS_SCORE:
0.5166
DSS_SCORE:
0.4404
HELIX:
0.0144
FCONS_SCORE:
1.2978
RIG_SCORE:
0.8199
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K143N
TCGA-05-4390
LUAD
TCGA
AVTTT
DEG_SPOP_SBC_1
0.1944
p.K143N
DO23562
LUAD
ICGC
AVTTT
DEG_SPOP_SBC_1
0.1944
p.A152D
TCGA-AP-A059
UCEC
TCGA
AVTTT
DEG_SPOP_SBC_1
0.7793
p.A152D
DO41361
UCEC
ICGC
AVTTT
DEG_SPOP_SBC_1
0.7793
p.T145I
DO7250
CLLE
ICGC
AVTTT
DEG_SPOP_SBC_1
0.1389
p.T148S
DO234149
ESAD
ICGC
AVTTT
DEG_SPOP_SBC_1
0.6667
p.R155G
DO233262
GACA
ICGC
AVTTT
DEG_SPOP_SBC_1
0.7568
p.A149S
DO229022
LICA
ICGC
AVTTT
DEG_SPOP_SBC_1
0.25
p.R160W
DO41871
UCEC
ICGC
AVTTT
DEG_SPOP_SBC_1
0.2222
p.L147V
SIDM00961
Ewing's Sarcoma
GDSC
AVTTT
DEG_SPOP_SBC_1
0.1944
p.L147V
SIDM01144
Gastric Carcinoma
GDSC
AVTTT
DEG_SPOP_SBC_1
0.1944
p.L147V
SIDM00247
Gastric Carcinoma
GDSC
AVTTT
DEG_SPOP_SBC_1
0.1944
p.L147V
SIDM00289
B-Lymphoblastic Leukemia
GDSC
AVTTT
DEG_SPOP_SBC_1
0.1944
p.L147V
SIDM00603
Head and Neck Carcinoma
GDSC
AVTTT
DEG_SPOP_SBC_1
0.1944
p.L147V
SIDM01659
Kidney Carcinoma
GDSC
AVTTT
DEG_SPOP_SBC_1
0.1944
p.L147V
SIDM01770
Gastric Carcinoma
GDSC
AVTTT
DEG_SPOP_SBC_1
0.1944
p.L147V
SIDM01469
Pancreatic Carcinoma
GDSC
AVTTT
DEG_SPOP_SBC_1
0.1944
p.K146N
SIDM01774
Pancreatic Carcinoma
GDSC
AVTTT
DEG_SPOP_SBC_1
0.2778
p.K146N
ACH-000205
Pancreatic Cancer
CCLE
AVTTT
DEG_SPOP_SBC_1
0.2778
p.K146N
ACH-002024
Colon/Colorectal Cancer
CCLE
AVTTT
DEG_SPOP_SBC_1
0.2778
Drug responses associated with PILRB mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AVTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15054
Lysine-specific demethylase 6B
DEG_SPOP_SBC_1
750:754
AVTTT
SPOP
0.963
More...
O95104
SR-related and CTD-associated factor 4
DEG_SPOP_SBC_1
284:288
AVTTT
SPOP
0.5941
More...
P52756
RNA-binding protein 5
DEG_SPOP_SBC_1
400:404
AVTTT
SPOP
0.6447
More...
Q6Q4G3
Aminopeptidase Q
DEG_SPOP_SBC_1
79:83
AVTTT
SPOP
0.9845
More...
Q86SE5
RNA-binding Raly-like protein
DEG_SPOP_SBC_1
162:166
AVTTT
SPOP
0.9953
More...
Q8IWI9
MAX gene-associated protein
DEG_SPOP_SBC_1
1596:1600
AVTTT
SPOP
0.5077
More...
Q9H3R2
Mucin-13
DEG_SPOP_SBC_1
27:31
AVTTT
SPOP
0.8418
More...
Q9NSU2
Three-prime repair exonuclease 1
DEG_SPOP_SBC_1
247:251
AVTTT
SPOP
0.9952
More...
Q9UKJ1
Paired immunoglobulin-like type 2 receptor alpha
DEG_SPOP_SBC_1
152:156
AVTTT
SPOP
0.5634
More...
Q9Y2H9
Microtubule-associated serine/threonine-protein kinase 1
DEG_SPOP_SBC_1
1048:1052
AVTTT
SPOP
0.8655
More...
Q9UKJ0
Paired immunoglobulin-like type 2 receptor beta
DEG_SPOP_SBC_1
152:156
AVTTT
SPOP
0.7899
More...
A2A368
Melanoma-associated antigen B16
DEG_SPOP_SBC_1
74:78
AVTTT
SPOP
0.5345
More...