DegronMD: protein-targeted degradation, mutation and drug response to degrons
Home
(current)
Browse
Proteins/Degrons
Mutations
Drug response
Network-rewiring
Drug resistance
Search
Tutorial
Download
Contact
Links
BSML
CPH
CGC
Degron:
AVTTT
Uniprot ID:
Q9NSU2
Source protein:
Three-prime repair exonuclease 1
Source gene:
TREX1
Class:
DEG_SPOP_SBC_1
Location:
247:251
E3 ligase:
SPOP
DEGRON score:
0.9952
ASA_SCORE:
77.98
COIL:
0.7306
CONS_SCORE:
0.6063
DSS_SCORE:
0.6717
HELIX:
0.1268
FCONS_SCORE:
0.9893
RIG_SCORE:
0.7057
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P246T
TCGA-D3-A1Q3
SKCM
TCGA
AVTTT
DEG_SPOP_SBC_1
0.3056
p.D248Y
ACH-002121
Skin Cancer
CCLE
AVTTT
DEG_SPOP_SBC_1
0.7325
p.D248Y
G-MEL
skin
COSMIC
AVTTT
DEG_SPOP_SBC_1
0.7325
p.P243R
EB2
haematopoietic_and_lymphoid_tissue
COSMIC
AVTTT
DEG_SPOP_SBC_1
0.2222
p.A239D
TGBC11TKB
stomach
COSMIC
AVTTT
DEG_SPOP_SBC_1
0.1111
p.P245L
KM12
large_intestine
COSMIC
AVTTT
DEG_SPOP_SBC_1
0.2778
Drug responses associated with TREX1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AVTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15054
Lysine-specific demethylase 6B
DEG_SPOP_SBC_1
750:754
AVTTT
SPOP
0.963
More...
O95104
SR-related and CTD-associated factor 4
DEG_SPOP_SBC_1
284:288
AVTTT
SPOP
0.5941
More...
P52756
RNA-binding protein 5
DEG_SPOP_SBC_1
400:404
AVTTT
SPOP
0.6447
More...
Q6Q4G3
Aminopeptidase Q
DEG_SPOP_SBC_1
79:83
AVTTT
SPOP
0.9845
More...
Q86SE5
RNA-binding Raly-like protein
DEG_SPOP_SBC_1
162:166
AVTTT
SPOP
0.9953
More...
Q8IWI9
MAX gene-associated protein
DEG_SPOP_SBC_1
1596:1600
AVTTT
SPOP
0.5077
More...
Q9H3R2
Mucin-13
DEG_SPOP_SBC_1
27:31
AVTTT
SPOP
0.8418
More...
Q9NSU2
Three-prime repair exonuclease 1
DEG_SPOP_SBC_1
247:251
AVTTT
SPOP
0.9952
More...
Q9UKJ1
Paired immunoglobulin-like type 2 receptor alpha
DEG_SPOP_SBC_1
152:156
AVTTT
SPOP
0.5634
More...
Q9Y2H9
Microtubule-associated serine/threonine-protein kinase 1
DEG_SPOP_SBC_1
1048:1052
AVTTT
SPOP
0.8655
More...
Q9UKJ0
Paired immunoglobulin-like type 2 receptor beta
DEG_SPOP_SBC_1
152:156
AVTTT
SPOP
0.7899
More...
A2A368
Melanoma-associated antigen B16
DEG_SPOP_SBC_1
74:78
AVTTT
SPOP
0.5345
More...