DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AVTTT
Uniprot ID:
O95104
Source protein:
SR-related and CTD-associated factor 4
Source gene:
SCAF4
Class:
DEG_SPOP_SBC_1
Location:
284:288
E3 ligase:
SPOP
DEGRON score:
0.5941
ASA_SCORE:
94.78
COIL:
0.902
CONS_SCORE:
0.2412
DSS_SCORE:
0.5853
HELIX:
0.0664
FCONS_SCORE:
0.8233
RIG_SCORE:
0.7438
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V285I
TCGA-AP-A051
UCEC
TCGA
AVTTT
DEG_SPOP_SBC_1
0.5965
p.V285I
DO42673
UCEC
ICGC
AVTTT
DEG_SPOP_SBC_1
0.5965
p.T287M
TCGA-DF-A2KU
UCEC
TCGA
AVTTT
DEG_SPOP_SBC_1
0.7423
p.T287M
DO223286
UCEC
ICGC
AVTTT
DEG_SPOP_SBC_1
0.7423
p.T286I
DO234230
ESAD
ICGC
AVTTT
DEG_SPOP_SBC_1
0.7078
p.T288K
DO229027
LICA
ICGC
AVTTT
DEG_SPOP_SBC_1
0.7306
p.P298H
DO229035
LICA
ICGC
AVTTT
DEG_SPOP_SBC_1
0.0556
p.V274M
SIDM01178
Other Solid Cancers
GDSC
AVTTT
DEG_SPOP_SBC_1
0.0556
p.V274M
ACH-002200
Skin Cancer
CCLE
AVTTT
DEG_SPOP_SBC_1
0.0556
p.V274M
SW962
vulva
COSMIC
AVTTT
DEG_SPOP_SBC_1
0.0556
p.K279Q
SIDM00754
Non-Small Cell Lung Carcinoma
GDSC
AVTTT
DEG_SPOP_SBC_1
0.3056
p.K279Q
ACH-000379
Lung Cancer
CCLE
AVTTT
DEG_SPOP_SBC_1
0.3056
p.K279Q
NCI-H1781
lung
COSMIC
AVTTT
DEG_SPOP_SBC_1
0.3056
p.P298L
SIDM00516
Melanoma
GDSC
AVTTT
DEG_SPOP_SBC_1
0.0556
p.P298L
ACH-002166
Skin Cancer
CCLE
AVTTT
DEG_SPOP_SBC_1
0.0556
p.P298L
MZ7-mel
skin
COSMIC
AVTTT
DEG_SPOP_SBC_1
0.0556
p.P283L
MZ7-mel
skin
COSMIC
AVTTT
DEG_SPOP_SBC_1
0.3056
p.A285T
SNU-175
large_intestine
COSMIC
AVTTT
DEG_SPOP_SBC_1
0.7139
Drug responses associated with SCAF4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AVTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15054
Lysine-specific demethylase 6B
DEG_SPOP_SBC_1
750:754
AVTTT
SPOP
0.963
More...
O95104
SR-related and CTD-associated factor 4
DEG_SPOP_SBC_1
284:288
AVTTT
SPOP
0.5941
More...
P52756
RNA-binding protein 5
DEG_SPOP_SBC_1
400:404
AVTTT
SPOP
0.6447
More...
Q6Q4G3
Aminopeptidase Q
DEG_SPOP_SBC_1
79:83
AVTTT
SPOP
0.9845
More...
Q86SE5
RNA-binding Raly-like protein
DEG_SPOP_SBC_1
162:166
AVTTT
SPOP
0.9953
More...
Q8IWI9
MAX gene-associated protein
DEG_SPOP_SBC_1
1596:1600
AVTTT
SPOP
0.5077
More...
Q9H3R2
Mucin-13
DEG_SPOP_SBC_1
27:31
AVTTT
SPOP
0.8418
More...
Q9NSU2
Three-prime repair exonuclease 1
DEG_SPOP_SBC_1
247:251
AVTTT
SPOP
0.9952
More...
Q9UKJ1
Paired immunoglobulin-like type 2 receptor alpha
DEG_SPOP_SBC_1
152:156
AVTTT
SPOP
0.5634
More...
Q9Y2H9
Microtubule-associated serine/threonine-protein kinase 1
DEG_SPOP_SBC_1
1048:1052
AVTTT
SPOP
0.8655
More...
Q9UKJ0
Paired immunoglobulin-like type 2 receptor beta
DEG_SPOP_SBC_1
152:156
AVTTT
SPOP
0.7899
More...
A2A368
Melanoma-associated antigen B16
DEG_SPOP_SBC_1
74:78
AVTTT
SPOP
0.5345
More...