DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
PETSS
Uniprot ID:
Q2KHR2
Source protein:
DNA-binding protein RFX7
Source gene:
RFX7
Class:
DEG_SPOP_SBC_1
Location:
444:448
E3 ligase:
SPOP
DEGRON score:
0.5922
ASA_SCORE:
92.78
COIL:
0.929
CONS_SCORE:
0.3173
DSS_SCORE:
0.6921
HELIX:
0.0518
FCONS_SCORE:
0.92
RIG_SCORE:
0.5944
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P436R
TCGA-85-8354
LUSC
TCGA
PETSS
DEG_SPOP_SBC_1
0.1111
p.T448A
TCGA-AP-A1DK
UCEC
TCGA
PETSS
DEG_SPOP_SBC_1
0.7139
p.P447T
TCGA-D3-A8GB
SKCM
TCGA
PETSS
DEG_SPOP_SBC_1
0.7031
p.E445K
DO2641
BRCA
ICGC
PETSS
DEG_SPOP_SBC_1
0.591
p.E450K
DO219080
HNSC
ICGC
PETSS
DEG_SPOP_SBC_1
0.2778
p.D449N
DO219080
HNSC
ICGC
PETSS
DEG_SPOP_SBC_1
0.3056
p.H451R
DO26716
LUSC
ICGC
PETSS
DEG_SPOP_SBC_1
0.25
p.E457D
DO41235
UCEC
ICGC
PETSS
DEG_SPOP_SBC_1
0.0833
p.A437D
DO43755
UCEC
ICGC
PETSS
DEG_SPOP_SBC_1
0.1389
p.G434V
SIDM00672
Hepatocellular Carcinoma
GDSC
PETSS
DEG_SPOP_SBC_1
0.0556
p.S436F
SIDM00767
Small Cell Lung Carcinoma
GDSC
PETSS
DEG_SPOP_SBC_1
0.1111
p.S436F
ACH-001136
Lung Cancer
CCLE
PETSS
DEG_SPOP_SBC_1
0.1111
p.S436F
NCI-H187
lung
COSMIC
PETSS
DEG_SPOP_SBC_1
0.1111
p.P452R
SIDM01025
Esophageal Squamous Cell Carcinoma
GDSC
PETSS
DEG_SPOP_SBC_1
0.2222
p.P452R
ACH-000637
Esophageal Cancer
CCLE
PETSS
DEG_SPOP_SBC_1
0.2222
p.P452R
KYSE-520
oesophagus
COSMIC
PETSS
DEG_SPOP_SBC_1
0.2222
p.T446K
ACH-000552
Colon/Colorectal Cancer
CCLE
PETSS
DEG_SPOP_SBC_1
0.7306
Drug responses associated with RFX7 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PETSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15018
PDZ domain-containing protein 2
DEG_SPOP_SBC_1
2431:2435
PETSS
SPOP
0.9627
More...
P16150
Leukosialin
DEG_SPOP_SBC_1
140:144
PETSS
SPOP
0.963
More...
P49116
Nuclear receptor subfamily 2 group C member 2
DEG_SPOP_SBC_1
69:73
PETSS
SPOP
0.9587
More...
Q2KHR2
DNA-binding protein RFX7
DEG_SPOP_SBC_1
444:448
PETSS
SPOP
0.5922
More...
Q5JXC2
Migration and invasion-inhibitory protein
DEG_SPOP_SBC_1
55:59
PETSS
SPOP
0.7541
More...
Q5TD94
Radial spoke head protein 4 homolog A
DEG_SPOP_SBC_1
77:81
PETSS
SPOP
0.8068
More...
Q8IYB4
PEX5-related protein
DEG_SPOP_SBC_1
161:165
PETSS
SPOP
0.8276
More...
Q8IZF0
Sodium leak channel NALCN
DEG_SPOP_SBC_1
1634:1638
PETSS
SPOP
0.7934
More...
Q96JG9
Zinc finger protein 469
DEG_SPOP_SBC_1
2775:2779
PETSS
SPOP
0.9491
More...
Q99504
Eyes absent homolog 3
DEG_SPOP_SBC_1
38:42
PETSS
SPOP
0.9647
More...
Q9NR48
Histone-lysine N-methyltransferase ASH1L
DEG_SPOP_SBC_1
572:576
PETSS
SPOP
0.5145
More...
Q9Y5E8
Protocadherin beta-15
DEG_SPOP_SBC_1
143:147
PETSS
SPOP
0.7195
More...
A2AJT9
BCLAF1 and THRAP3 family member 3
DEG_SPOP_SBC_1
269:273
PETSS
SPOP
0.866
More...
P78312
Protein FAM193A
DEG_SPOP_SBC_1
979:983
PETSS
SPOP
0.9825
More...
P0C874
Spermatogenesis-associated protein 31D3
DEG_SPOP_SBC_1
786:790
PETSS
SPOP
0.6572
More...
Q5T1A1
DC-STAMP domain-containing protein 2
DEG_SPOP_SBC_1
739:743
PETSS
SPOP
0.9843
More...
Q6ZQQ2
Spermatogenesis-associated protein 31D1
DEG_SPOP_SBC_1
789:793
PETSS
SPOP
0.8868
More...
Q6ZUB0
Spermatogenesis-associated protein 31D4
DEG_SPOP_SBC_1
786:790
PETSS
SPOP
0.8838
More...
Q9ULG3
Uncharacterized protein CFAP92
DEG_SPOP_SBC_1
276:280
PETSS
SPOP
0.9829
More...