DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PETSS
Uniprot ID:
Q8IYB4
Source protein:
PEX5-related protein
Source gene:
PEX5L
Class:
DEG_SPOP_SBC_1
Location:
161:165
E3 ligase:
SPOP
DEGRON score:
0.8276
ASA_SCORE:
76.5
COIL:
0.73
CONS_SCORE:
0.3209
DSS_SCORE:
0.5792
HELIX:
0.19
FCONS_SCORE:
0.9692
RIG_SCORE:
0.7257
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E162D
TCGA-A5-A0G2
UCEC
TCGA
PETSS
DEG_SPOP_SBC_1
0.5647
p.P161L
TCGA-AA-3858
COAD
TCGA
PETSS
DEG_SPOP_SBC_1
0.7582
p.P161L
SIDM00687
Gastric Carcinoma
GDSC
PETSS
DEG_SPOP_SBC_1
0.7582
p.P161L
ACH-000793
Gastric Cancer
CCLE
PETSS
DEG_SPOP_SBC_1
0.7582
p.P161L
KATOIII
stomach
COSMIC
PETSS
DEG_SPOP_SBC_1
0.7582
p.E162Q
TCGA-CN-4723
HNSC
TCGA
PETSS
DEG_SPOP_SBC_1
0.5633
p.E175K
TCGA-CV-7568
HNSC
TCGA
PETSS
DEG_SPOP_SBC_1
0.0556
p.D169Y
TCGA-EE-A2GT
SKCM
TCGA
PETSS
DEG_SPOP_SBC_1
0.2222
p.S164L
TCGA-L9-A7SV
LUAD
TCGA
PETSS
DEG_SPOP_SBC_1
0.7667
p.Q172H
DO219255
PRAD
ICGC
PETSS
DEG_SPOP_SBC_1
0.1389
p.E158K
DO220056
SARC
ICGC
PETSS
DEG_SPOP_SBC_1
0.25
p.A160S
DO42673
UCEC
ICGC
PETSS
DEG_SPOP_SBC_1
0.3056
p.Q173H
SIDM00773
Non-Cancerous
GDSC
PETSS
DEG_SPOP_SBC_1
0.1111
p.Q173H
SIDM00855
Other Sarcomas
GDSC
PETSS
DEG_SPOP_SBC_1
0.1111
p.Q173H
SIDM00529
Breast Carcinoma
GDSC
PETSS
DEG_SPOP_SBC_1
0.1111
p.Q173H
SIDM00493
Other Solid Cancers
GDSC
PETSS
DEG_SPOP_SBC_1
0.1111
p.Q173H
SIDM00309
Mesothelioma
GDSC
PETSS
DEG_SPOP_SBC_1
0.1111
p.Q173H
SIDM00032
Bladder Carcinoma
GDSC
PETSS
DEG_SPOP_SBC_1
0.1111
p.Q173H
SIDM00721
Small Cell Lung Carcinoma
GDSC
PETSS
DEG_SPOP_SBC_1
0.1111
p.Q173H
SIDM00774
Breast Carcinoma
GDSC
PETSS
DEG_SPOP_SBC_1
0.1111
p.Q173H
SIDM00257
Neuroblastoma
GDSC
PETSS
DEG_SPOP_SBC_1
0.1111
p.L158F
SIDM00114
Non-Small Cell Lung Carcinoma
GDSC
PETSS
DEG_SPOP_SBC_1
0.25
p.L158F
H513
pleura
COSMIC
PETSS
DEG_SPOP_SBC_1
0.25
p.T163S
SIDM01257
Hepatocellular Carcinoma
GDSC
PETSS
DEG_SPOP_SBC_1
0.6005
p.T163S
SIDM00062
Hepatocellular Carcinoma
GDSC
PETSS
DEG_SPOP_SBC_1
0.6005
p.T163S
ACH-000671
Liver Cancer
CCLE
PETSS
DEG_SPOP_SBC_1
0.6005
p.T163S
ACH-002395
Liver Cancer
CCLE
PETSS
DEG_SPOP_SBC_1
0.6005
p.T163S
HUH-6-clone5
liver
COSMIC
PETSS
DEG_SPOP_SBC_1
0.6005
p.P161Q
ACH-001538
Bile Duct Cancer
CCLE
PETSS
DEG_SPOP_SBC_1
0.7035
p.P159L
KATOIII
stomach
COSMIC
PETSS
DEG_SPOP_SBC_1
0.2778
p.L161M
NCI-H1105
lung
COSMIC
PETSS
DEG_SPOP_SBC_1
0.711
p.T168S
NCI-H1993
lung
COSMIC
PETSS
DEG_SPOP_SBC_1
0.25
p.V165L
NCI-H2342
lung
COSMIC
PETSS
DEG_SPOP_SBC_1
0.6765
p.S174L
SW684
soft_tissue
COSMIC
PETSS
DEG_SPOP_SBC_1
0.0833
p.L156F
H513
pleura
COSMIC
PETSS
DEG_SPOP_SBC_1
0.1944
p.S170Y
DU-145
prostate
COSMIC
PETSS
DEG_SPOP_SBC_1
0.1944
p.P165L
HCC-366
lung
COSMIC
PETSS
DEG_SPOP_SBC_1
0.7582
p.E159Q
H513
pleura
COSMIC
PETSS
DEG_SPOP_SBC_1
0.2778
p.S155L
SW684
soft_tissue
COSMIC
PETSS
DEG_SPOP_SBC_1
0.1667
p.S163L
SW684
soft_tissue
COSMIC
PETSS
DEG_SPOP_SBC_1
0.7667
p.T161S
HUH-6-clone5
liver
COSMIC
PETSS
DEG_SPOP_SBC_1
0.7116
p.Q163E
NCI-H441
lung
COSMIC
PETSS
DEG_SPOP_SBC_1
0.6744
p.T160S
NCI-H1993
lung
COSMIC
PETSS
DEG_SPOP_SBC_1
0.3056
Drug responses associated with PEX5L mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PETSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15018
PDZ domain-containing protein 2
DEG_SPOP_SBC_1
2431:2435
PETSS
SPOP
0.9627
More...
P16150
Leukosialin
DEG_SPOP_SBC_1
140:144
PETSS
SPOP
0.963
More...
P49116
Nuclear receptor subfamily 2 group C member 2
DEG_SPOP_SBC_1
69:73
PETSS
SPOP
0.9587
More...
Q2KHR2
DNA-binding protein RFX7
DEG_SPOP_SBC_1
444:448
PETSS
SPOP
0.5922
More...
Q5JXC2
Migration and invasion-inhibitory protein
DEG_SPOP_SBC_1
55:59
PETSS
SPOP
0.7541
More...
Q5TD94
Radial spoke head protein 4 homolog A
DEG_SPOP_SBC_1
77:81
PETSS
SPOP
0.8068
More...
Q8IYB4
PEX5-related protein
DEG_SPOP_SBC_1
161:165
PETSS
SPOP
0.8276
More...
Q8IZF0
Sodium leak channel NALCN
DEG_SPOP_SBC_1
1634:1638
PETSS
SPOP
0.7934
More...
Q96JG9
Zinc finger protein 469
DEG_SPOP_SBC_1
2775:2779
PETSS
SPOP
0.9491
More...
Q99504
Eyes absent homolog 3
DEG_SPOP_SBC_1
38:42
PETSS
SPOP
0.9647
More...
Q9NR48
Histone-lysine N-methyltransferase ASH1L
DEG_SPOP_SBC_1
572:576
PETSS
SPOP
0.5145
More...
Q9Y5E8
Protocadherin beta-15
DEG_SPOP_SBC_1
143:147
PETSS
SPOP
0.7195
More...
A2AJT9
BCLAF1 and THRAP3 family member 3
DEG_SPOP_SBC_1
269:273
PETSS
SPOP
0.866
More...
P78312
Protein FAM193A
DEG_SPOP_SBC_1
979:983
PETSS
SPOP
0.9825
More...
P0C874
Spermatogenesis-associated protein 31D3
DEG_SPOP_SBC_1
786:790
PETSS
SPOP
0.6572
More...
Q5T1A1
DC-STAMP domain-containing protein 2
DEG_SPOP_SBC_1
739:743
PETSS
SPOP
0.9843
More...
Q6ZQQ2
Spermatogenesis-associated protein 31D1
DEG_SPOP_SBC_1
789:793
PETSS
SPOP
0.8868
More...
Q6ZUB0
Spermatogenesis-associated protein 31D4
DEG_SPOP_SBC_1
786:790
PETSS
SPOP
0.8838
More...
Q9ULG3
Uncharacterized protein CFAP92
DEG_SPOP_SBC_1
276:280
PETSS
SPOP
0.9829
More...