DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PETSS
Uniprot ID:
Q9Y5E8
Source protein:
Protocadherin beta-15
Source gene:
PCDHB15
Class:
DEG_SPOP_SBC_1
Location:
143:147
E3 ligase:
SPOP
DEGRON score:
0.7195
ASA_SCORE:
48.02
COIL:
0.6274
CONS_SCORE:
0.6573
DSS_SCORE:
0.3966
HELIX:
0.0328
FCONS_SCORE:
1.0525
RIG_SCORE:
0.7284
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T145S
TCGA-05-4398
LUAD
TCGA
PETSS
DEG_SPOP_SBC_1
0.6005
p.T145S
DO25847
LUAD
ICGC
PETSS
DEG_SPOP_SBC_1
0.6005
p.F152L
TCGA-16-0861
GBM
TCGA
PETSS
DEG_SPOP_SBC_1
0.1944
p.F152L
DO12064
GBM
ICGC
PETSS
DEG_SPOP_SBC_1
0.1944
p.E135K
TCGA-CN-A6V1
HNSC
TCGA
PETSS
DEG_SPOP_SBC_1
0.1111
p.E135K
TCGA-E7-A85H
BLCA
TCGA
PETSS
DEG_SPOP_SBC_1
0.1111
p.E135K
DO219018
BLCA
ICGC
PETSS
DEG_SPOP_SBC_1
0.1111
p.E135K
DO52048
HNSC
ICGC
PETSS
DEG_SPOP_SBC_1
0.1111
p.K141E
TCGA-DX-AB2Q
SARC
TCGA
PETSS
DEG_SPOP_SBC_1
0.2778
p.K141E
DO220087
SARC
ICGC
PETSS
DEG_SPOP_SBC_1
0.2778
p.P134S
TCGA-EB-A44P
SKCM
TCGA
PETSS
DEG_SPOP_SBC_1
0.0833
p.P134S
TCGA-EE-A2MT
SKCM
TCGA
PETSS
DEG_SPOP_SBC_1
0.0833
p.P134S
DO47525
SKCM
ICGC
PETSS
DEG_SPOP_SBC_1
0.0833
p.P134S
DO38051
SKCM
ICGC
PETSS
DEG_SPOP_SBC_1
0.0833
p.I142T
TCGA-EX-A8YF
CESC
TCGA
PETSS
DEG_SPOP_SBC_1
0.3056
p.I142T
DO49970
CESC
ICGC
PETSS
DEG_SPOP_SBC_1
0.3056
p.K155R
TCGA-EY-A1G8
UCEC
TCGA
PETSS
DEG_SPOP_SBC_1
0.2222
p.K155R
DO43578
UCEC
ICGC
PETSS
DEG_SPOP_SBC_1
0.2222
p.P143T
TCGA-NC-A5HE
LUSC
TCGA
PETSS
DEG_SPOP_SBC_1
0.7031
p.P143T
DO45453
LUSC
ICGC
PETSS
DEG_SPOP_SBC_1
0.7031
p.P143Q
TCGA-NC-A5HE
LUSC
TCGA
PETSS
DEG_SPOP_SBC_1
0.7035
p.P143Q
DO45453
LUSC
ICGC
PETSS
DEG_SPOP_SBC_1
0.7035
p.P153S
DO222892
BTCA
ICGC
PETSS
DEG_SPOP_SBC_1
0.1667
p.P153S
SIDM00078
Oral Cavity Carcinoma
GDSC
PETSS
DEG_SPOP_SBC_1
0.1667
p.P153S
SIDM00080
Melanoma
GDSC
PETSS
DEG_SPOP_SBC_1
0.1667
p.M138I
SIDM00007
Other Solid Cancers
GDSC
PETSS
DEG_SPOP_SBC_1
0.1944
p.M138I
ACH-001550
Skin Cancer
CCLE
PETSS
DEG_SPOP_SBC_1
0.1944
p.M138I
MCC13
skin
COSMIC
PETSS
DEG_SPOP_SBC_1
0.1944
p.G149E
SIDM00007
Other Solid Cancers
GDSC
PETSS
DEG_SPOP_SBC_1
0.2778
p.G149E
ACH-001550
Skin Cancer
CCLE
PETSS
DEG_SPOP_SBC_1
0.2778
p.G149E
MCC13
skin
COSMIC
PETSS
DEG_SPOP_SBC_1
0.2778
Drug responses associated with PCDHB15 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PETSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15018
PDZ domain-containing protein 2
DEG_SPOP_SBC_1
2431:2435
PETSS
SPOP
0.9627
More...
P16150
Leukosialin
DEG_SPOP_SBC_1
140:144
PETSS
SPOP
0.963
More...
P49116
Nuclear receptor subfamily 2 group C member 2
DEG_SPOP_SBC_1
69:73
PETSS
SPOP
0.9587
More...
Q2KHR2
DNA-binding protein RFX7
DEG_SPOP_SBC_1
444:448
PETSS
SPOP
0.5922
More...
Q5JXC2
Migration and invasion-inhibitory protein
DEG_SPOP_SBC_1
55:59
PETSS
SPOP
0.7541
More...
Q5TD94
Radial spoke head protein 4 homolog A
DEG_SPOP_SBC_1
77:81
PETSS
SPOP
0.8068
More...
Q8IYB4
PEX5-related protein
DEG_SPOP_SBC_1
161:165
PETSS
SPOP
0.8276
More...
Q8IZF0
Sodium leak channel NALCN
DEG_SPOP_SBC_1
1634:1638
PETSS
SPOP
0.7934
More...
Q96JG9
Zinc finger protein 469
DEG_SPOP_SBC_1
2775:2779
PETSS
SPOP
0.9491
More...
Q99504
Eyes absent homolog 3
DEG_SPOP_SBC_1
38:42
PETSS
SPOP
0.9647
More...
Q9NR48
Histone-lysine N-methyltransferase ASH1L
DEG_SPOP_SBC_1
572:576
PETSS
SPOP
0.5145
More...
Q9Y5E8
Protocadherin beta-15
DEG_SPOP_SBC_1
143:147
PETSS
SPOP
0.7195
More...
A2AJT9
BCLAF1 and THRAP3 family member 3
DEG_SPOP_SBC_1
269:273
PETSS
SPOP
0.866
More...
P78312
Protein FAM193A
DEG_SPOP_SBC_1
979:983
PETSS
SPOP
0.9825
More...
P0C874
Spermatogenesis-associated protein 31D3
DEG_SPOP_SBC_1
786:790
PETSS
SPOP
0.6572
More...
Q5T1A1
DC-STAMP domain-containing protein 2
DEG_SPOP_SBC_1
739:743
PETSS
SPOP
0.9843
More...
Q6ZQQ2
Spermatogenesis-associated protein 31D1
DEG_SPOP_SBC_1
789:793
PETSS
SPOP
0.8868
More...
Q6ZUB0
Spermatogenesis-associated protein 31D4
DEG_SPOP_SBC_1
786:790
PETSS
SPOP
0.8838
More...
Q9ULG3
Uncharacterized protein CFAP92
DEG_SPOP_SBC_1
276:280
PETSS
SPOP
0.9829
More...