DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PKTSS
Uniprot ID:
O43314
Source protein:
Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2
Source gene:
PPIP5K2
Class:
DEG_SPOP_SBC_1
Location:
489:493
E3 ligase:
SPOP
DEGRON score:
0.8197
ASA_SCORE:
81.62
COIL:
0.8604
CONS_SCORE:
0.266
DSS_SCORE:
0.5573
HELIX:
0.0974
FCONS_SCORE:
0.6389
RIG_SCORE:
0.6694
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L481F
TCGA-17-Z026
LUAD
TCGA
PKTSS
DEG_SPOP_SBC_1
0.1111
p.S498N
TCGA-19-5956
GBM
TCGA
PKTSS
DEG_SPOP_SBC_1
0.6389
p.S498N
DO13863
GBM
ICGC
PKTSS
DEG_SPOP_SBC_1
0.6389
p.G487D
TCGA-A5-A0G2
UCEC
TCGA
PKTSS
DEG_SPOP_SBC_1
0.2778
p.G487D
DO41235
UCEC
ICGC
PKTSS
DEG_SPOP_SBC_1
0.2778
p.R499Q
TCGA-AP-A0LM
UCEC
TCGA
PKTSS
DEG_SPOP_SBC_1
0.1667
p.R499Q
DO43306
UCEC
ICGC
PKTSS
DEG_SPOP_SBC_1
0.1667
p.E495D
TCGA-DK-A2I1
BLCA
TCGA
PKTSS
DEG_SPOP_SBC_1
0.2778
p.E495D
DO444
BLCA
ICGC
PKTSS
DEG_SPOP_SBC_1
0.2778
p.S492A
DO234454
BPLL
ICGC
PKTSS
DEG_SPOP_SBC_1
0.7588
p.S492Y
DO233035
GACA
ICGC
PKTSS
DEG_SPOP_SBC_1
0.712
p.E494G
DO228650
LICA
ICGC
PKTSS
DEG_SPOP_SBC_1
0.3056
p.G487V
DO228971
LICA
ICGC
PKTSS
DEG_SPOP_SBC_1
0.2778
p.D497G
SIDM01259
B-Lymphoblastic Leukemia
GDSC
PKTSS
DEG_SPOP_SBC_1
0.2222
p.D497G
GR-ST
haematopoietic_and_lymphoid_tissue
COSMIC
PKTSS
DEG_SPOP_SBC_1
0.2222
Drug responses associated with PPIP5K2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PKTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43303
Centriolar coiled-coil protein of 110 kDa
DEG_SPOP_SBC_1
188:192
PKTSS
SPOP
0.6385
More...
O43314
Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2
DEG_SPOP_SBC_1
489:493
PKTSS
SPOP
0.8197
More...
Q14966
Zinc finger protein 638
DEG_SPOP_SBC_1
610:614
PKTSS
SPOP
0.8762
More...
Q6ZT12
E3 ubiquitin-protein ligase UBR3
DEG_SPOP_SBC_1
1063:1067
PKTSS
SPOP
0.955
More...
Q6ZWJ1
Syntaxin-binding protein 4
DEG_SPOP_SBC_1
149:153
PKTSS
SPOP
0.8731
More...
Q8NFC6
Biorientation of chromosomes in cell division protein 1-like 1
DEG_SPOP_SBC_1
2822:2826
PKTSS
SPOP
0.9052
More...
Q8TCU4
Alstrom syndrome protein 1
DEG_SPOP_SBC_1
3053:3057
PKTSS
SPOP
0.8531
More...
Q96GS4
BLOC-1-related complex subunit 6
DEG_SPOP_SBC_1
62:66
PKTSS
SPOP
0.9347
More...
Q9BX26
Synaptonemal complex protein 2
DEG_SPOP_SBC_1
1141:1145
PKTSS
SPOP
0.958
More...
Q9NSI6
Bromodomain and WD repeat-containing protein 1
DEG_SPOP_SBC_1
1292:1296
PKTSS
SPOP
0.6269
More...
Q9Y6B7
AP-4 complex subunit beta-1
DEG_SPOP_SBC_1
589:593
PKTSS
SPOP
0.9969
More...