DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PKTSS
Uniprot ID:
Q8NFC6
Source protein:
Biorientation of chromosomes in cell division protein 1-like 1
Source gene:
BOD1L1
Class:
DEG_SPOP_SBC_1
Location:
2822:2826
E3 ligase:
SPOP
DEGRON score:
0.9052
ASA_SCORE:
101.76
COIL:
0.911
CONS_SCORE:
0.3992
DSS_SCORE:
0.7308
HELIX:
0.0602
FCONS_SCORE:
0.8911
RIG_SCORE:
0.6028
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E2820D
TCGA-A5-A0G2
UCEC
TCGA
PKTSS
DEG_SPOP_SBC_1
0.2778
p.E2820D
DO41235
UCEC
ICGC
PKTSS
DEG_SPOP_SBC_1
0.2778
p.L2821S
TCGA-AA-3510
COAD
TCGA
PKTSS
DEG_SPOP_SBC_1
0.3056
p.L2821S
DO7783
COAD
ICGC
PKTSS
DEG_SPOP_SBC_1
0.3056
p.S2826Y
TCGA-AP-A1DV
UCEC
TCGA
PKTSS
DEG_SPOP_SBC_1
0.712
p.S2826Y
DO43186
UCEC
ICGC
PKTSS
DEG_SPOP_SBC_1
0.712
p.S2830R
DO228912
LICA
ICGC
PKTSS
DEG_SPOP_SBC_1
0.2222
p.S2830R
DO229027
LICA
ICGC
PKTSS
DEG_SPOP_SBC_1
0.2222
p.N2829I
DO231622
LINC
ICGC
PKTSS
DEG_SPOP_SBC_1
0.25
p.T2831A
SIDM00537
Colorectal Carcinoma
GDSC
PKTSS
DEG_SPOP_SBC_1
0.1944
p.T2831A
ACH-001345
Colon/Colorectal Cancer
CCLE
PKTSS
DEG_SPOP_SBC_1
0.1944
p.T2831A
GP5d
large_intestine
COSMIC
PKTSS
DEG_SPOP_SBC_1
0.1944
Drug responses associated with BOD1L1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PKTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43303
Centriolar coiled-coil protein of 110 kDa
DEG_SPOP_SBC_1
188:192
PKTSS
SPOP
0.6385
More...
O43314
Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2
DEG_SPOP_SBC_1
489:493
PKTSS
SPOP
0.8197
More...
Q14966
Zinc finger protein 638
DEG_SPOP_SBC_1
610:614
PKTSS
SPOP
0.8762
More...
Q6ZT12
E3 ubiquitin-protein ligase UBR3
DEG_SPOP_SBC_1
1063:1067
PKTSS
SPOP
0.955
More...
Q6ZWJ1
Syntaxin-binding protein 4
DEG_SPOP_SBC_1
149:153
PKTSS
SPOP
0.8731
More...
Q8NFC6
Biorientation of chromosomes in cell division protein 1-like 1
DEG_SPOP_SBC_1
2822:2826
PKTSS
SPOP
0.9052
More...
Q8TCU4
Alstrom syndrome protein 1
DEG_SPOP_SBC_1
3053:3057
PKTSS
SPOP
0.8531
More...
Q96GS4
BLOC-1-related complex subunit 6
DEG_SPOP_SBC_1
62:66
PKTSS
SPOP
0.9347
More...
Q9BX26
Synaptonemal complex protein 2
DEG_SPOP_SBC_1
1141:1145
PKTSS
SPOP
0.958
More...
Q9NSI6
Bromodomain and WD repeat-containing protein 1
DEG_SPOP_SBC_1
1292:1296
PKTSS
SPOP
0.6269
More...
Q9Y6B7
AP-4 complex subunit beta-1
DEG_SPOP_SBC_1
589:593
PKTSS
SPOP
0.9969
More...