DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PKTSS
Uniprot ID:
Q9Y6B7
Source protein:
AP-4 complex subunit beta-1
Source gene:
AP4B1
Class:
DEG_SPOP_SBC_1
Location:
589:593
E3 ligase:
SPOP
DEGRON score:
0.9969
ASA_SCORE:
84.58
COIL:
0.8178
CONS_SCORE:
0.3552
DSS_SCORE:
0.499
HELIX:
0.156
FCONS_SCORE:
1.0755
RIG_SCORE:
0.7012
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A596T
TCGA-KK-A8IG
PRAD
TCGA
PKTSS
DEG_SPOP_SBC_1
0.25
p.A596T
DO219331
PRAD
ICGC
PKTSS
DEG_SPOP_SBC_1
0.25
p.A581S
TCGA-KQ-A41O
BLCA
TCGA
PKTSS
DEG_SPOP_SBC_1
0.1111
p.A581S
DO223589
BLCA
ICGC
PKTSS
DEG_SPOP_SBC_1
0.1111
p.S593F
TCGA-WE-A8K6
SKCM
TCGA
PKTSS
DEG_SPOP_SBC_1
0.9093
p.S593F
DO51283
SKCM
ICGC
PKTSS
DEG_SPOP_SBC_1
0.9093
p.G580R
SIDM01187
Breast Carcinoma
GDSC
PKTSS
DEG_SPOP_SBC_1
0.0833
p.G580R
ACH-000568
Breast Cancer
CCLE
PKTSS
DEG_SPOP_SBC_1
0.0833
p.G580R
UACC-812
breast
COSMIC
PKTSS
DEG_SPOP_SBC_1
0.0833
Drug responses associated with AP4B1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PKTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43303
Centriolar coiled-coil protein of 110 kDa
DEG_SPOP_SBC_1
188:192
PKTSS
SPOP
0.6385
More...
O43314
Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2
DEG_SPOP_SBC_1
489:493
PKTSS
SPOP
0.8197
More...
Q14966
Zinc finger protein 638
DEG_SPOP_SBC_1
610:614
PKTSS
SPOP
0.8762
More...
Q6ZT12
E3 ubiquitin-protein ligase UBR3
DEG_SPOP_SBC_1
1063:1067
PKTSS
SPOP
0.955
More...
Q6ZWJ1
Syntaxin-binding protein 4
DEG_SPOP_SBC_1
149:153
PKTSS
SPOP
0.8731
More...
Q8NFC6
Biorientation of chromosomes in cell division protein 1-like 1
DEG_SPOP_SBC_1
2822:2826
PKTSS
SPOP
0.9052
More...
Q8TCU4
Alstrom syndrome protein 1
DEG_SPOP_SBC_1
3053:3057
PKTSS
SPOP
0.8531
More...
Q96GS4
BLOC-1-related complex subunit 6
DEG_SPOP_SBC_1
62:66
PKTSS
SPOP
0.9347
More...
Q9BX26
Synaptonemal complex protein 2
DEG_SPOP_SBC_1
1141:1145
PKTSS
SPOP
0.958
More...
Q9NSI6
Bromodomain and WD repeat-containing protein 1
DEG_SPOP_SBC_1
1292:1296
PKTSS
SPOP
0.6269
More...
Q9Y6B7
AP-4 complex subunit beta-1
DEG_SPOP_SBC_1
589:593
PKTSS
SPOP
0.9969
More...