DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PLTTS
Uniprot ID:
Q9P107
Source protein:
GEM-interacting protein
Source gene:
GMIP
Class:
DEG_SPOP_SBC_1
Location:
779:783
E3 ligase:
SPOP
DEGRON score:
0.6642
ASA_SCORE:
90.8
COIL:
0.925
CONS_SCORE:
0.2831
DSS_SCORE:
0.9391
HELIX:
0.0298
FCONS_SCORE:
1.0004
RIG_SCORE:
0.4726
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P777T
TCGA-F7-A624
HNSC
TCGA
PLTTS
DEG_SPOP_SBC_1
0.2778
p.P789L
TCGA-FI-A2D0
UCEC
TCGA
PLTTS
DEG_SPOP_SBC_1
0.1667
p.D792N
TCGA-PK-A5HB
ACC
TCGA
PLTTS
DEG_SPOP_SBC_1
0.0833
p.T793R
DO222878
BTCA
ICGC
PLTTS
DEG_SPOP_SBC_1
0.0556
p.H785R
DO44440
HNSC
ICGC
PLTTS
DEG_SPOP_SBC_1
0.2778
p.Q790H
DO228916
LICA
ICGC
PLTTS
DEG_SPOP_SBC_1
0.1389
p.P772S
DO228947
LICA
ICGC
PLTTS
DEG_SPOP_SBC_1
0.1389
p.P772S
DO230522
LUSC
ICGC
PLTTS
DEG_SPOP_SBC_1
0.1389
p.P772S
DO231102
LUSC
ICGC
PLTTS
DEG_SPOP_SBC_1
0.1389
p.T787N
DO228976
LICA
ICGC
PLTTS
DEG_SPOP_SBC_1
0.2222
p.S769F
DO47569
SKCM
ICGC
PLTTS
DEG_SPOP_SBC_1
0.0556
p.Q770R
DO47833
STAD
ICGC
PLTTS
DEG_SPOP_SBC_1
0.0833
p.S774I
SIDM00135
Breast Carcinoma
GDSC
PLTTS
DEG_SPOP_SBC_1
0.1944
p.S774I
SIDM01123
Prostate Carcinoma
GDSC
PLTTS
DEG_SPOP_SBC_1
0.1944
p.S774I
SIDM00841
Colorectal Carcinoma
GDSC
PLTTS
DEG_SPOP_SBC_1
0.1944
p.S774I
SIDM00534
Colorectal Carcinoma
GDSC
PLTTS
DEG_SPOP_SBC_1
0.1944
p.S774I
SIDM01566
Hodgkin's Lymphoma
GDSC
PLTTS
DEG_SPOP_SBC_1
0.1944
p.P770H
SIDM01125
Non-Small Cell Lung Carcinoma
GDSC
PLTTS
DEG_SPOP_SBC_1
0.0833
p.P770H
ACH-000378
Lung Cancer
CCLE
PLTTS
DEG_SPOP_SBC_1
0.0833
p.P779L
SIDM01596
Non-Small Cell Lung Carcinoma
GDSC
PLTTS
DEG_SPOP_SBC_1
0.7582
p.P779L
ACH-000066
Lung Cancer
CCLE
PLTTS
DEG_SPOP_SBC_1
0.7582
Drug responses associated with GMIP mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PLTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A7MD48
Serine/arginine repetitive matrix protein 4
DEG_SPOP_SBC_1
274:278
PLTTS
SPOP
0.9836
More...
O15018
PDZ domain-containing protein 2
DEG_SPOP_SBC_1
300:304
PLTTS
SPOP
0.9856
More...
P29074
Tyrosine-protein phosphatase non-receptor type 4
DEG_SPOP_SBC_1
919:923
PLTTS
SPOP
0.847
More...
Q14246
Adhesion G protein-coupled receptor E1
DEG_SPOP_SBC_1
501:505
PLTTS
SPOP
0.7492
More...
Q5SW79
Centrosomal protein of 170 kDa
DEG_SPOP_SBC_1
562:566
PLTTS
SPOP
0.994
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
187:191
PLTTS
SPOP
0.968
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
9734:9738
PLTTS
SPOP
0.8464
More...
Q9NQU5
Serine/threonine-protein kinase PAK 6
DEG_SPOP_SBC_1
320:324
PLTTS
SPOP
0.9576
More...
Q9P107
GEM-interacting protein
DEG_SPOP_SBC_1
779:783
PLTTS
SPOP
0.6642
More...
Q96RV3
Pecanex-like protein 1
DEG_SPOP_SBC_1
715:719
PLTTS
SPOP
0.9997
More...
Q96RV3
Pecanex-like protein 1
DEG_SPOP_SBC_1
1997:2001
PLTTS
SPOP
0.9692
More...
Q9Y2D9
Zinc finger protein 652
DEG_SPOP_SBC_1
507:511
PLTTS
SPOP
0.9882
More...
Q9P2C4
Transmembrane protein 181
DEG_SPOP_SBC_1
47:51
PLTTS
SPOP
0.6212
More...
Q0P670
Uncharacterized protein SPEM2
DEG_SPOP_SBC_1
397:401
PLTTS
SPOP
0.9988
More...