DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VESTS
Uniprot ID:
P13611
Source protein:
Versican core protein
Source gene:
VCAN
Class:
DEG_SPOP_SBC_1
Location:
2290:2294
E3 ligase:
SPOP
DEGRON score:
0.6598
ASA_SCORE:
86.92
COIL:
0.7354
CONS_SCORE:
0.4536
DSS_SCORE:
0.5338
HELIX:
0.0336
FCONS_SCORE:
1.0277
RIG_SCORE:
0.6985
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P2285T
TCGA-AA-A00N
COAD
TCGA
VESTS
DEG_SPOP_SBC_1
0.1944
p.P2285T
DO9876
COAD
ICGC
VESTS
DEG_SPOP_SBC_1
0.1944
p.M2304I
TCGA-BF-A1PU
SKCM
TCGA
VESTS
DEG_SPOP_SBC_1
0.0556
p.M2304I
DO50278
SKCM
ICGC
VESTS
DEG_SPOP_SBC_1
0.0556
p.R2303K
TCGA-XF-A9T8
BLCA
TCGA
VESTS
DEG_SPOP_SBC_1
0.0833
p.R2303K
DO51927
BLCA
ICGC
VESTS
DEG_SPOP_SBC_1
0.0833
p.F2301Y
DO230334
COCA
ICGC
VESTS
DEG_SPOP_SBC_1
0.1389
p.F2301Y
DO229010
COCA
ICGC
VESTS
DEG_SPOP_SBC_1
0.1389
p.F2301Y
DO229013
COCA
ICGC
VESTS
DEG_SPOP_SBC_1
0.1389
p.F2301Y
DO229016
COCA
ICGC
VESTS
DEG_SPOP_SBC_1
0.1389
p.F2301Y
DO229346
LAML
ICGC
VESTS
DEG_SPOP_SBC_1
0.1389
p.F2301Y
DO229480
LAML
ICGC
VESTS
DEG_SPOP_SBC_1
0.1389
p.F2301Y
DO228941
LICA
ICGC
VESTS
DEG_SPOP_SBC_1
0.1389
p.F2301Y
DO228947
LICA
ICGC
VESTS
DEG_SPOP_SBC_1
0.1389
p.F2301Y
DO229047
LICA
ICGC
VESTS
DEG_SPOP_SBC_1
0.1389
p.F2301Y
DO230990
LUSC
ICGC
VESTS
DEG_SPOP_SBC_1
0.1389
p.V2292I
HCC1395
breast
COSMIC
VESTS
DEG_SPOP_SBC_1
0.7076
p.P2293S
SW684
soft_tissue
COSMIC
VESTS
DEG_SPOP_SBC_1
0.6752
p.T2301M
PF-382
haematopoietic_and_lymphoid_tissue
COSMIC
VESTS
DEG_SPOP_SBC_1
0.1389
Drug responses associated with VCAN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VESTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P13611
Versican core protein
DEG_SPOP_SBC_1
2290:2294
VESTS
SPOP
0.6598
More...
P18583
Protein SON
DEG_SPOP_SBC_1
279:283
VESTS
SPOP
0.9537
More...
P41229
Lysine-specific demethylase 5C
DEG_SPOP_SBC_1
283:287
VESTS
SPOP
0.9432
More...
Q04656
Copper-transporting ATPase 1
DEG_SPOP_SBC_1
351:355
VESTS
SPOP
0.6792
More...
Q14693
Phosphatidate phosphatase LPIN1
DEG_SPOP_SBC_1
451:455
VESTS
SPOP
0.9287
More...
Q6UX34
Protein SNORC
DEG_SPOP_SBC_1
49:53
VESTS
SPOP
0.8482
More...
Q8IXF0
Neuronal PAS domain-containing protein 3
DEG_SPOP_SBC_1
245:249
VESTS
SPOP
0.9923
More...
Q8TEP8
Centrosomal protein of 192 kDa
DEG_SPOP_SBC_1
668:672
VESTS
SPOP
0.5574
More...
Q96H15
T-cell immunoglobulin and mucin domain-containing protein 4
DEG_SPOP_SBC_1
240:244
VESTS
SPOP
0.993
More...
Q9BY11
Protein kinase C and casein kinase substrate in neurons protein 1
DEG_SPOP_SBC_1
335:339
VESTS
SPOP
0.6175
More...
Q9NQW6
Anillin
DEG_SPOP_SBC_1
88:92
VESTS
SPOP
0.9904
More...
Q9Y4G2
Pleckstrin homology domain-containing family M member 1
DEG_SPOP_SBC_1
390:394
VESTS
SPOP
0.9903
More...