DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VESTS
Uniprot ID:
Q04656
Source protein:
Copper-transporting ATPase 1
Source gene:
ATP7A
Class:
DEG_SPOP_SBC_1
Location:
351:355
E3 ligase:
SPOP
DEGRON score:
0.6792
ASA_SCORE:
81.46
COIL:
0.776
CONS_SCORE:
0.2574
DSS_SCORE:
0.4662
HELIX:
0.1546
FCONS_SCORE:
0.9582
RIG_SCORE:
0.6457
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S353R
TCGA-AU-6004
COAD
TCGA
VESTS
DEG_SPOP_SBC_1
0.8538
p.S353R
DO7780
COAD
ICGC
VESTS
DEG_SPOP_SBC_1
0.8538
p.S349C
TCGA-EO-A22X
UCEC
TCGA
VESTS
DEG_SPOP_SBC_1
0.7222
p.S349C
DO43907
UCEC
ICGC
VESTS
DEG_SPOP_SBC_1
0.7222
p.L363I
TCGA-L4-A4E5
LUAD
TCGA
VESTS
DEG_SPOP_SBC_1
0.1111
p.L363I
DO24320
LUAD
ICGC
VESTS
DEG_SPOP_SBC_1
0.1111
p.E353D
DO50820
LIRI
ICGC
VESTS
DEG_SPOP_SBC_1
0.6758
p.F364V
DO43891
UCEC
ICGC
VESTS
DEG_SPOP_SBC_1
0.0833
p.Q364H
SIDM00728
Non-Small Cell Lung Carcinoma
GDSC
VESTS
DEG_SPOP_SBC_1
0.0833
p.Q364H
NCI-H2291
lung
COSMIC
VESTS
DEG_SPOP_SBC_1
0.0833
Drug responses associated with ATP7A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VESTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P13611
Versican core protein
DEG_SPOP_SBC_1
2290:2294
VESTS
SPOP
0.6598
More...
P18583
Protein SON
DEG_SPOP_SBC_1
279:283
VESTS
SPOP
0.9537
More...
P41229
Lysine-specific demethylase 5C
DEG_SPOP_SBC_1
283:287
VESTS
SPOP
0.9432
More...
Q04656
Copper-transporting ATPase 1
DEG_SPOP_SBC_1
351:355
VESTS
SPOP
0.6792
More...
Q14693
Phosphatidate phosphatase LPIN1
DEG_SPOP_SBC_1
451:455
VESTS
SPOP
0.9287
More...
Q6UX34
Protein SNORC
DEG_SPOP_SBC_1
49:53
VESTS
SPOP
0.8482
More...
Q8IXF0
Neuronal PAS domain-containing protein 3
DEG_SPOP_SBC_1
245:249
VESTS
SPOP
0.9923
More...
Q8TEP8
Centrosomal protein of 192 kDa
DEG_SPOP_SBC_1
668:672
VESTS
SPOP
0.5574
More...
Q96H15
T-cell immunoglobulin and mucin domain-containing protein 4
DEG_SPOP_SBC_1
240:244
VESTS
SPOP
0.993
More...
Q9BY11
Protein kinase C and casein kinase substrate in neurons protein 1
DEG_SPOP_SBC_1
335:339
VESTS
SPOP
0.6175
More...
Q9NQW6
Anillin
DEG_SPOP_SBC_1
88:92
VESTS
SPOP
0.9904
More...
Q9Y4G2
Pleckstrin homology domain-containing family M member 1
DEG_SPOP_SBC_1
390:394
VESTS
SPOP
0.9903
More...