DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VFSSS
Uniprot ID:
P49790
Source protein:
Nuclear pore complex protein Nup153
Source gene:
NUP153
Class:
DEG_SPOP_SBC_1
Location:
1454:1458
E3 ligase:
SPOP
DEGRON score:
0.9973
ASA_SCORE:
75.02
COIL:
0.8532
CONS_SCORE:
0.3386
DSS_SCORE:
0.4271
HELIX:
0.0288
FCONS_SCORE:
0.9071
RIG_SCORE:
0.6977
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1457C
TCGA-56-7822
LUSC
TCGA
VFSSS
DEG_SPOP_SBC_1
0.8652
p.S1457C
DO26638
LUSC
ICGC
VFSSS
DEG_SPOP_SBC_1
0.8652
p.V1454M
ACH-000980
Lung Cancer
CCLE
VFSSS
DEG_SPOP_SBC_1
0.7208
p.V1454M
NCI-H1155
lung
COSMIC
VFSSS
DEG_SPOP_SBC_1
0.7208
p.F1462L
TCGA-AP-A0LM
UCEC
TCGA
VFSSS
DEG_SPOP_SBC_1
0.2222
p.F1462L
DO1101
BRCA
ICGC
VFSSS
DEG_SPOP_SBC_1
0.2222
p.F1462L
DO43306
UCEC
ICGC
VFSSS
DEG_SPOP_SBC_1
0.2222
p.G1466C
SIDM01219
Non-Small Cell Lung Carcinoma
GDSC
VFSSS
DEG_SPOP_SBC_1
0.2222
p.G1466C
SIDM00607
Glioblastoma
GDSC
VFSSS
DEG_SPOP_SBC_1
0.2222
p.G1466C
SIDM00251
Gastric Carcinoma
GDSC
VFSSS
DEG_SPOP_SBC_1
0.2222
p.G1466C
SIDM00564
Ovarian Carcinoma
GDSC
VFSSS
DEG_SPOP_SBC_1
0.2222
p.G1466C
SIDM01575
Plasma Cell Myeloma
GDSC
VFSSS
DEG_SPOP_SBC_1
0.2222
p.G1466C
SIDM00162
Biliary Tract Carcinoma
GDSC
VFSSS
DEG_SPOP_SBC_1
0.2222
p.G1466C
TGBC11TKB
stomach
COSMIC
VFSSS
DEG_SPOP_SBC_1
0.2222
p.G1466C
LU-99A
lung
COSMIC
VFSSS
DEG_SPOP_SBC_1
0.2222
p.G1466C
KNS-42
central_nervous_system
COSMIC
VFSSS
DEG_SPOP_SBC_1
0.2222
p.G1466C
OVISE
ovary
COSMIC
VFSSS
DEG_SPOP_SBC_1
0.2222
p.S1462L
SIDM00895
B-Cell Non-Hodgkin's Lymphoma
GDSC
VFSSS
DEG_SPOP_SBC_1
0.2222
p.S1462L
BC-3
haematopoietic_and_lymphoid_tissue
COSMIC
VFSSS
DEG_SPOP_SBC_1
0.2222
Showing 1 to 19 of 19 entries
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Drug responses associated with NUP153 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of VFSSS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7Z408
CUB and sushi domain-containing protein 2
DEG_SPOP_SBC_1
2911:2915
VFSSS
SPOP
0.6868
More...
P15924
Desmoplakin
DEG_SPOP_SBC_1
2581:2585
VFSSS
SPOP
0.8811
More...
P09630
Homeobox protein Hox-C6
DEG_SPOP_SBC_1
62:66
VFSSS
SPOP
0.9955
More...
Q86YV5
Inactive tyrosine-protein kinase PRAG1
DEG_SPOP_SBC_1
875:879
VFSSS
SPOP
0.9995
More...
Q6ZN01
MEF2-activating motif and SAP domain-containing transcriptional regulator
DEG_SPOP_SBC_1
350:354
VFSSS
SPOP
0.9978
More...
Q9NV56
MRG/MORF4L-binding protein
DEG_SPOP_SBC_1
143:147
VFSSS
SPOP
0.9763
More...
Q6DN14
Multiple C2 and transmembrane domain-containing protein 1
DEG_SPOP_SBC_1
91:95
VFSSS
SPOP
0.9709
More...
P49790
Nuclear pore complex protein Nup153
DEG_SPOP_SBC_1
1454:1458
VFSSS
SPOP
0.9973
More...
Q16720
Plasma membrane calcium-transporting ATPase 3
DEG_SPOP_SBC_1
1204:1208
VFSSS
SPOP
0.8618
More...
Q96ND0
Protein FAM210A
DEG_SPOP_SBC_1
95:99
VFSSS
SPOP
0.9987
More...
Q07889
Son of sevenless homolog 1
DEG_SPOP_SBC_1
1225:1229
VFSSS
SPOP
0.9959
More...
Q5T5J6
Transcriptional protein SWT1
DEG_SPOP_SBC_1
740:744
VFSSS
SPOP
0.9982
More...
Q9UPU5
Ubiquitin carboxyl-terminal hydrolase 24
DEG_SPOP_SBC_1
1058:1062
VFSSS
SPOP
0.9322
More...
Showing 1 to 13 of 13 entries
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