DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VFSSS
Uniprot ID:
Q07889
Source protein:
Son of sevenless homolog 1
Source gene:
SOS1
Class:
DEG_SPOP_SBC_1
Location:
1225:1229
E3 ligase:
SPOP
DEGRON score:
0.9959
ASA_SCORE:
73.34
COIL:
0.9238
CONS_SCORE:
0.2332
DSS_SCORE:
0.6765
HELIX:
0.0458
FCONS_SCORE:
0.9774
RIG_SCORE:
0.6257
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L1231V
TCGA-04-1362
OV
TCGA
VFSSS
DEG_SPOP_SBC_1
0.2778
p.P1236S
TCGA-44-A4SS
LUAD
TCGA
VFSSS
DEG_SPOP_SBC_1
0.1389
p.P1236S
DO24227
LUAD
ICGC
VFSSS
DEG_SPOP_SBC_1
0.1389
p.L1233I
TCGA-AG-A002
READ
TCGA
VFSSS
DEG_SPOP_SBC_1
0.2222
p.P1237A
TCGA-C5-A7CO
CESC
TCGA
VFSSS
DEG_SPOP_SBC_1
0.1111
p.P1237A
DO49888
CESC
ICGC
VFSSS
DEG_SPOP_SBC_1
0.1111
p.P1237A
SIDM01055
Glioblastoma
GDSC
VFSSS
DEG_SPOP_SBC_1
0.1111
p.P1237A
GAMG
central_nervous_system
COSMIC
VFSSS
DEG_SPOP_SBC_1
0.1111
p.H1232N
DO229037
LICA
ICGC
VFSSS
DEG_SPOP_SBC_1
0.25
p.L1216V
DO30260
OV
ICGC
VFSSS
DEG_SPOP_SBC_1
0.0833
p.D1228G
DO41331
UCEC
ICGC
VFSSS
DEG_SPOP_SBC_1
0.7198
p.S1239P
DO43971
UCEC
ICGC
VFSSS
DEG_SPOP_SBC_1
0.0556
p.R1217Q
SIDM00753
Squamous Cell Lung Carcinoma
GDSC
VFSSS
DEG_SPOP_SBC_1
0.1111
p.R1217Q
NCI-H2023
lung
COSMIC
VFSSS
DEG_SPOP_SBC_1
0.1111
p.F1233C
ACH-000697
Lymphoma
CCLE
VFSSS
DEG_SPOP_SBC_1
0.2222
p.F1233C
A3-KAW
haematopoietic_and_lymphoid_tissue
COSMIC
VFSSS
DEG_SPOP_SBC_1
0.2222
p.K1226E
PFSK-1
central_nervous_system
COSMIC
VFSSS
DEG_SPOP_SBC_1
0.7022
p.P1222A
GAMG
central_nervous_system
COSMIC
VFSSS
DEG_SPOP_SBC_1
0.6944
Drug responses associated with SOS1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VFSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P15924
Desmoplakin
DEG_SPOP_SBC_1
2581:2585
VFSSS
SPOP
0.8811
More...
P49790
Nuclear pore complex protein Nup153
DEG_SPOP_SBC_1
1454:1458
VFSSS
SPOP
0.9973
More...
Q07889
Son of sevenless homolog 1
DEG_SPOP_SBC_1
1225:1229
VFSSS
SPOP
0.9959
More...
Q16720
Plasma membrane calcium-transporting ATPase 3
DEG_SPOP_SBC_1
1204:1208
VFSSS
SPOP
0.8618
More...
Q6DN14
Multiple C2 and transmembrane domain-containing protein 1
DEG_SPOP_SBC_1
91:95
VFSSS
SPOP
0.9709
More...
Q86YV5
Inactive tyrosine-protein kinase PRAG1
DEG_SPOP_SBC_1
875:879
VFSSS
SPOP
0.9995
More...
Q9NV56
MRG/MORF4L-binding protein
DEG_SPOP_SBC_1
143:147
VFSSS
SPOP
0.9763
More...
Q9UPU5
Ubiquitin carboxyl-terminal hydrolase 24
DEG_SPOP_SBC_1
1058:1062
VFSSS
SPOP
0.9322
More...
P09630
Homeobox protein Hox-C6
DEG_SPOP_SBC_1
62:66
VFSSS
SPOP
0.9955
More...
Q7Z408
CUB and sushi domain-containing protein 2
DEG_SPOP_SBC_1
2911:2915
VFSSS
SPOP
0.6868
More...
Q5T5J6
Transcriptional protein SWT1
DEG_SPOP_SBC_1
740:744
VFSSS
SPOP
0.9982
More...
Q6ZN01
MEF2-activating motif and SAP domain-containing transcriptional regulator
DEG_SPOP_SBC_1
350:354
VFSSS
SPOP
0.9978
More...
Q96ND0
Protein FAM210A
DEG_SPOP_SBC_1
95:99
VFSSS
SPOP
0.9987
More...