DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VFSSS
Uniprot ID:
Q9NV56
Source protein:
MRG/MORF4L-binding protein
Source gene:
MRGBP
Class:
DEG_SPOP_SBC_1
Location:
143:147
E3 ligase:
SPOP
DEGRON score:
0.9763
ASA_SCORE:
77.36
COIL:
0.8262
CONS_SCORE:
0.4249
DSS_SCORE:
0.646
HELIX:
0.1098
FCONS_SCORE:
0.9436
RIG_SCORE:
0.657
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S157C
TCGA-91-6828
LUAD
TCGA
VFSSS
DEG_SPOP_SBC_1
0.0556
p.S157C
DO26150
LUAD
ICGC
VFSSS
DEG_SPOP_SBC_1
0.0556
p.D135N
TCGA-AA-3663
COAD
TCGA
VFSSS
DEG_SPOP_SBC_1
0.1111
p.D135N
DO9346
COAD
ICGC
VFSSS
DEG_SPOP_SBC_1
0.1111
p.A153S
TCGA-B5-A11E
UCEC
TCGA
VFSSS
DEG_SPOP_SBC_1
0.1667
p.A153S
DO41644
UCEC
ICGC
VFSSS
DEG_SPOP_SBC_1
0.1667
p.S157F
TCGA-B5-A3FC
UCEC
TCGA
VFSSS
DEG_SPOP_SBC_1
0.0556
p.S157F
DO41871
UCEC
ICGC
VFSSS
DEG_SPOP_SBC_1
0.0556
p.S149N
TCGA-TQ-A7RU
LGG
TCGA
VFSSS
DEG_SPOP_SBC_1
0.7222
p.S149N
DO223698
LGG
ICGC
VFSSS
DEG_SPOP_SBC_1
0.7222
p.S145L
DO222864
COCA
ICGC
VFSSS
DEG_SPOP_SBC_1
0.7667
p.S154L
SIDM00845
Burkitt's Lymphoma
GDSC
VFSSS
DEG_SPOP_SBC_1
0.1389
p.S154L
SIDM00461
Acute Myeloid Leukemia
GDSC
VFSSS
DEG_SPOP_SBC_1
0.1389
p.S154L
SIDM00946
T-Lymphoblastic Leukemia
GDSC
VFSSS
DEG_SPOP_SBC_1
0.1389
p.S154L
SIDM01519
Head and Neck Carcinoma
GDSC
VFSSS
DEG_SPOP_SBC_1
0.1389
p.S154L
ACH-000786
Lymphoma
CCLE
VFSSS
DEG_SPOP_SBC_1
0.1389
p.S154L
ACH-000992
Head and Neck Cancer
CCLE
VFSSS
DEG_SPOP_SBC_1
0.1389
p.S154L
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
VFSSS
DEG_SPOP_SBC_1
0.1389
p.D135E
SIDM00681
Colorectal Carcinoma
GDSC
VFSSS
DEG_SPOP_SBC_1
0.1111
p.D135E
SIDM01641
Non-Cancerous
GDSC
VFSSS
DEG_SPOP_SBC_1
0.1111
p.D135E
ACH-000252
Colon/Colorectal Cancer
CCLE
VFSSS
DEG_SPOP_SBC_1
0.1111
p.D135E
ACH-002376
Non-Cancerous
CCLE
VFSSS
DEG_SPOP_SBC_1
0.1111
p.S157P
ACH-000960
Leukemia
CCLE
VFSSS
DEG_SPOP_SBC_1
0.0556
Drug responses associated with MRGBP mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VFSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P15924
Desmoplakin
DEG_SPOP_SBC_1
2581:2585
VFSSS
SPOP
0.8811
More...
P49790
Nuclear pore complex protein Nup153
DEG_SPOP_SBC_1
1454:1458
VFSSS
SPOP
0.9973
More...
Q07889
Son of sevenless homolog 1
DEG_SPOP_SBC_1
1225:1229
VFSSS
SPOP
0.9959
More...
Q16720
Plasma membrane calcium-transporting ATPase 3
DEG_SPOP_SBC_1
1204:1208
VFSSS
SPOP
0.8618
More...
Q6DN14
Multiple C2 and transmembrane domain-containing protein 1
DEG_SPOP_SBC_1
91:95
VFSSS
SPOP
0.9709
More...
Q86YV5
Inactive tyrosine-protein kinase PRAG1
DEG_SPOP_SBC_1
875:879
VFSSS
SPOP
0.9995
More...
Q9NV56
MRG/MORF4L-binding protein
DEG_SPOP_SBC_1
143:147
VFSSS
SPOP
0.9763
More...
Q9UPU5
Ubiquitin carboxyl-terminal hydrolase 24
DEG_SPOP_SBC_1
1058:1062
VFSSS
SPOP
0.9322
More...
P09630
Homeobox protein Hox-C6
DEG_SPOP_SBC_1
62:66
VFSSS
SPOP
0.9955
More...
Q7Z408
CUB and sushi domain-containing protein 2
DEG_SPOP_SBC_1
2911:2915
VFSSS
SPOP
0.6868
More...
Q5T5J6
Transcriptional protein SWT1
DEG_SPOP_SBC_1
740:744
VFSSS
SPOP
0.9982
More...
Q6ZN01
MEF2-activating motif and SAP domain-containing transcriptional regulator
DEG_SPOP_SBC_1
350:354
VFSSS
SPOP
0.9978
More...
Q96ND0
Protein FAM210A
DEG_SPOP_SBC_1
95:99
VFSSS
SPOP
0.9987
More...