DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VKSSS
Uniprot ID:
P55197
Source protein:
Protein AF-10
Source gene:
MLLT10
Class:
DEG_SPOP_SBC_1
Location:
360:364
E3 ligase:
SPOP
DEGRON score:
0.8251
ASA_SCORE:
85.68
COIL:
0.7904
CONS_SCORE:
0.3212
DSS_SCORE:
0.6319
HELIX:
0.0426
FCONS_SCORE:
0.9767
RIG_SCORE:
0.5655
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S364C
TCGA-4Z-AA81
BLCA
TCGA
VKSSS
DEG_SPOP_SBC_1
0.7541
p.S364C
DO51868
BLCA
ICGC
VKSSS
DEG_SPOP_SBC_1
0.7541
p.S359I
TCGA-60-2713
LUSC
TCGA
VKSSS
DEG_SPOP_SBC_1
0.3056
p.S359I
DO26476
LUSC
ICGC
VKSSS
DEG_SPOP_SBC_1
0.3056
p.K361Q
DO7801
COAD
ICGC
VKSSS
DEG_SPOP_SBC_1
0.5833
p.G365R
DO228189
LICA
ICGC
VKSSS
DEG_SPOP_SBC_1
0.3056
p.P357L
DO220906
MELA
ICGC
VKSSS
DEG_SPOP_SBC_1
0.25
p.F374Y
SIDM00661
B-Cell Non-Hodgkin's Lymphoma
GDSC
VKSSS
DEG_SPOP_SBC_1
0.0556
p.F374Y
ACH-000914
Lymphoma
CCLE
VKSSS
DEG_SPOP_SBC_1
0.0556
p.F374Y
HT
haematopoietic_and_lymphoid_tissue
COSMIC
VKSSS
DEG_SPOP_SBC_1
0.0556
p.S352N
SIDM00190
Melanoma
GDSC
VKSSS
DEG_SPOP_SBC_1
0.1111
p.S352N
ACH-002097
Skin Cancer
CCLE
VKSSS
DEG_SPOP_SBC_1
0.1111
p.S352N
CP66-MEL
skin
COSMIC
VKSSS
DEG_SPOP_SBC_1
0.1111
Drug responses associated with MLLT10 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VKSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60882
Matrix metalloproteinase-20
DEG_SPOP_SBC_1
475:479
VKSSS
SPOP
0.6246
More...
O75952
Calcium-binding tyrosine phosphorylation-regulated protein
DEG_SPOP_SBC_1
465:469
VKSSS
SPOP
0.975
More...
P29375
Lysine-specific demethylase 5A
DEG_SPOP_SBC_1
1363:1367
VKSSS
SPOP
0.9347
More...
P55197
Protein AF-10
DEG_SPOP_SBC_1
360:364
VKSSS
SPOP
0.8251
More...
Q2LD37
Transmembrane protein KIAA1109
DEG_SPOP_SBC_1
2319:2323
VKSSS
SPOP
0.9728
More...
Q5CZC0
Fibrous sheath-interacting protein 2
DEG_SPOP_SBC_1
3936:3940
VKSSS
SPOP
0.9325
More...
Q5U651
Ras-interacting protein 1
DEG_SPOP_SBC_1
45:49
VKSSS
SPOP
0.9869
More...
Q6P4R8
Nuclear factor related to kappa-B-binding protein
DEG_SPOP_SBC_1
686:690
VKSSS
SPOP
0.9003
More...
Q8IVL0
Neuron navigator 3
DEG_SPOP_SBC_1
1269:1273
VKSSS
SPOP
0.9831
More...
Q9UMS6
Synaptopodin-2
DEG_SPOP_SBC_1
765:769
VKSSS
SPOP
0.9977
More...
Q2KJY2
Kinesin-like protein KIF26B
DEG_SPOP_SBC_1
1532:1536
VKSSS
SPOP
0.9092
More...
Q5JRM2
Uncharacterized protein CXorf66
DEG_SPOP_SBC_1
303:307
VKSSS
SPOP
0.9382
More...