DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VKSSS
Uniprot ID:
Q5CZC0
Source protein:
Fibrous sheath-interacting protein 2
Source gene:
FSIP2
Class:
DEG_SPOP_SBC_1
Location:
3936:3940
E3 ligase:
SPOP
DEGRON score:
0.9325
ASA_SCORE:
79.22
COIL:
0.7938
CONS_SCORE:
0.3922
DSS_SCORE:
0.4315
HELIX:
0.076
FCONS_SCORE:
0.9805
RIG_SCORE:
0.6959
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N3931D
DO227999
COCA
ICGC
VKSSS
DEG_SPOP_SBC_1
0.1944
p.N3931D
DO229010
COCA
ICGC
VKSSS
DEG_SPOP_SBC_1
0.1944
p.N3931D
DO229013
COCA
ICGC
VKSSS
DEG_SPOP_SBC_1
0.1944
p.N3931D
DO229016
COCA
ICGC
VKSSS
DEG_SPOP_SBC_1
0.1944
p.N3931D
DO234285
ESAD
ICGC
VKSSS
DEG_SPOP_SBC_1
0.1944
p.N3931D
DO229047
LICA
ICGC
VKSSS
DEG_SPOP_SBC_1
0.1944
p.N3931D
DO231212
LUSC
ICGC
VKSSS
DEG_SPOP_SBC_1
0.1944
p.T3930I
DO50393
ESAD
ICGC
VKSSS
DEG_SPOP_SBC_1
0.1667
p.V3941M
DO42673
UCEC
ICGC
VKSSS
DEG_SPOP_SBC_1
0.3056
p.A3928S
SIDM00534
Colorectal Carcinoma
GDSC
VKSSS
DEG_SPOP_SBC_1
0.1111
p.A3928S
ACH-000986
Colon/Colorectal Cancer
CCLE
VKSSS
DEG_SPOP_SBC_1
0.1111
p.A3928S
HT-115
large_intestine
COSMIC
VKSSS
DEG_SPOP_SBC_1
0.1111
p.K3932R
ACH-001956
Bone Cancer
CCLE
VKSSS
DEG_SPOP_SBC_1
0.3333
Drug responses associated with FSIP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VKSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60882
Matrix metalloproteinase-20
DEG_SPOP_SBC_1
475:479
VKSSS
SPOP
0.6246
More...
O75952
Calcium-binding tyrosine phosphorylation-regulated protein
DEG_SPOP_SBC_1
465:469
VKSSS
SPOP
0.975
More...
P29375
Lysine-specific demethylase 5A
DEG_SPOP_SBC_1
1363:1367
VKSSS
SPOP
0.9347
More...
P55197
Protein AF-10
DEG_SPOP_SBC_1
360:364
VKSSS
SPOP
0.8251
More...
Q2LD37
Transmembrane protein KIAA1109
DEG_SPOP_SBC_1
2319:2323
VKSSS
SPOP
0.9728
More...
Q5CZC0
Fibrous sheath-interacting protein 2
DEG_SPOP_SBC_1
3936:3940
VKSSS
SPOP
0.9325
More...
Q5U651
Ras-interacting protein 1
DEG_SPOP_SBC_1
45:49
VKSSS
SPOP
0.9869
More...
Q6P4R8
Nuclear factor related to kappa-B-binding protein
DEG_SPOP_SBC_1
686:690
VKSSS
SPOP
0.9003
More...
Q8IVL0
Neuron navigator 3
DEG_SPOP_SBC_1
1269:1273
VKSSS
SPOP
0.9831
More...
Q9UMS6
Synaptopodin-2
DEG_SPOP_SBC_1
765:769
VKSSS
SPOP
0.9977
More...
Q2KJY2
Kinesin-like protein KIF26B
DEG_SPOP_SBC_1
1532:1536
VKSSS
SPOP
0.9092
More...
Q5JRM2
Uncharacterized protein CXorf66
DEG_SPOP_SBC_1
303:307
VKSSS
SPOP
0.9382
More...