DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CPH
CGC
Degron:
VPTTT
Uniprot ID:
O94880
Source protein:
PHD finger protein 14
Source gene:
PHF14
Class:
DEG_SPOP_SBC_1
Location:
166:170
E3 ligase:
SPOP
DEGRON score:
0.991
ASA_SCORE:
87.56
COIL:
0.954
CONS_SCORE:
0.303
DSS_SCORE:
0.6763
HELIX:
0.0204
FCONS_SCORE:
1.0124
RIG_SCORE:
0.6537
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P180L
TCGA-29-1691
OV
TCGA
VPTTT
DEG_SPOP_SBC_1
0.0556
p.P180L
DO32133
OV
ICGC
VPTTT
DEG_SPOP_SBC_1
0.0556
p.A172T
TCGA-AP-A051
UCEC
TCGA
VPTTT
DEG_SPOP_SBC_1
0.2778
p.A172T
TCGA-D1-A103
UCEC
TCGA
VPTTT
DEG_SPOP_SBC_1
0.2778
p.A172T
DO42312
UCEC
ICGC
VPTTT
DEG_SPOP_SBC_1
0.2778
p.A172T
DO42673
UCEC
ICGC
VPTTT
DEG_SPOP_SBC_1
0.2778
p.E179K
TCGA-EO-A3AV
UCEC
TCGA
VPTTT
DEG_SPOP_SBC_1
0.0833
p.E179K
DO222762
COCA
ICGC
VPTTT
DEG_SPOP_SBC_1
0.0833
p.E179K
DO52412
UCEC
ICGC
VPTTT
DEG_SPOP_SBC_1
0.0833
p.S165F
TCGA-VR-A8EX
ESCA
TCGA
VPTTT
DEG_SPOP_SBC_1
0.3056
p.D174V
DO7798
COAD
ICGC
VPTTT
DEG_SPOP_SBC_1
0.2222
p.T169M
DO222794
COCA
ICGC
VPTTT
DEG_SPOP_SBC_1
0.7423
p.T169M
DO222842
COCA
ICGC
VPTTT
DEG_SPOP_SBC_1
0.7423
p.D174Y
DO234303
ESAD
ICGC
VPTTT
DEG_SPOP_SBC_1
0.2222
p.S178G
DO223053
ESCA
ICGC
VPTTT
DEG_SPOP_SBC_1
0.1111
p.V169F
DO44448
HNSC
ICGC
VPTTT
DEG_SPOP_SBC_1
0.7068
p.C178F
DO228976
LICA
ICGC
VPTTT
DEG_SPOP_SBC_1
0.1111
p.S172I
DO229029
LICA
ICGC
VPTTT
DEG_SPOP_SBC_1
0.2778
p.R163C
DO25622
LUAD
ICGC
VPTTT
DEG_SPOP_SBC_1
0.6944
p.R163C
DO37406
SKCM
ICGC
VPTTT
DEG_SPOP_SBC_1
0.6944
p.R163C
DO223286
UCEC
ICGC
VPTTT
DEG_SPOP_SBC_1
0.6944
p.C173F
DO23744
LUAD
ICGC
VPTTT
DEG_SPOP_SBC_1
0.25
p.S172R
DO36556
READ
ICGC
VPTTT
DEG_SPOP_SBC_1
0.2778
p.G168W
DO51236
SKCM
ICGC
VPTTT
DEG_SPOP_SBC_1
0.7825
p.C178Y
DO52424
UCEC
ICGC
VPTTT
DEG_SPOP_SBC_1
0.1111
p.R163H
DO42608
UCEC
ICGC
VPTTT
DEG_SPOP_SBC_1
0.6944
p.T167A
DO41235
UCEC
ICGC
VPTTT
DEG_SPOP_SBC_1
0.7139
p.A159V
SIDM00516
Melanoma
GDSC
VPTTT
DEG_SPOP_SBC_1
0.1389
p.A159V
ACH-002166
Skin Cancer
CCLE
VPTTT
DEG_SPOP_SBC_1
0.1389
p.A159V
MZ7-mel
skin
COSMIC
VPTTT
DEG_SPOP_SBC_1
0.1389
p.S163F
SIDM00852
Glioma
GDSC
VPTTT
DEG_SPOP_SBC_1
0.6944
p.S163F
H4
central_nervous_system
COSMIC
VPTTT
DEG_SPOP_SBC_1
0.6944
p.V166L
SIDM00220
Ovarian Carcinoma
GDSC
VPTTT
DEG_SPOP_SBC_1
0.6765
p.V166L
ACH-000962
Ovarian Cancer
CCLE
VPTTT
DEG_SPOP_SBC_1
0.6765
p.V166L
ACH-001145
Ovarian Cancer
CCLE
VPTTT
DEG_SPOP_SBC_1
0.6765
p.V166L
OC-314
ovary
COSMIC
VPTTT
DEG_SPOP_SBC_1
0.6765
Drug responses associated with PHF14 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75829
Leukocyte cell-derived chemotaxin 1
DEG_SPOP_SBC_1
221:225
VPTTT
SPOP
0.9724
More...
P22105
Tenascin-X
DEG_SPOP_SBC_1
2834:2838
VPTTT
SPOP
0.8867
More...
P98171
Rho GTPase-activating protein 4
DEG_SPOP_SBC_1
200:204
VPTTT
SPOP
0.9213
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
5806:5810
VPTTT
SPOP
0.9863
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
11618:11622
VPTTT
SPOP
0.7076
More...
Q96D42
Hepatitis A virus cellular receptor 1
DEG_SPOP_SBC_1
150:154
VPTTT
SPOP
0.9885
More...
Q96D42
Hepatitis A virus cellular receptor 1
DEG_SPOP_SBC_1
161:165
VPTTT
SPOP
0.986
More...
Q96D42
Hepatitis A virus cellular receptor 1
DEG_SPOP_SBC_1
190:194
VPTTT
SPOP
0.9092
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
2051:2055
VPTTT
SPOP
0.9951
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
3308:3312
VPTTT
SPOP
0.993
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
3865:3869
VPTTT
SPOP
0.9882
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
4593:4597
VPTTT
SPOP
0.9609
More...
Q9UL68
Myelin transcription factor 1-like protein
DEG_SPOP_SBC_1
625:629
VPTTT
SPOP
0.8307
More...
Q9UPN9
E3 ubiquitin-protein ligase TRIM33
DEG_SPOP_SBC_1
543:547
VPTTT
SPOP
0.7751
More...
O94880
PHD finger protein 14
DEG_SPOP_SBC_1
166:170
VPTTT
SPOP
0.991
More...
Q8WW62
Transmembrane emp24 domain-containing protein 6
DEG_SPOP_SBC_1
229:233
VPTTT
SPOP
0.7106
More...