DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPTTT
Uniprot ID:
Q96D42
Source protein:
Hepatitis A virus cellular receptor 1
Source gene:
HAVCR1
Class:
DEG_SPOP_SBC_1
Location:
150:154
E3 ligase:
SPOP
DEGRON score:
0.9885
ASA_SCORE:
98.7
COIL:
0.964
CONS_SCORE:
0.2227
DSS_SCORE:
0.4768
HELIX:
0.0104
FCONS_SCORE:
0.994
RIG_SCORE:
0.7928
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T152M
TCGA-99-8033
LUAD
TCGA
VPTTT
DEG_SPOP_SBC_1
0.7423
p.T152M
TCGA-CV-5439
HNSC
TCGA
VPTTT
DEG_SPOP_SBC_1
0.7423
p.T152M
DO14200
HNSC
ICGC
VPTTT
DEG_SPOP_SBC_1
0.7423
p.T152M
DO23726
LUAD
ICGC
VPTTT
DEG_SPOP_SBC_1
0.7423
p.T152M
DO224594
LUSC
ICGC
VPTTT
DEG_SPOP_SBC_1
0.7423
p.T152M
DO227527
PBCA
ICGC
VPTTT
DEG_SPOP_SBC_1
0.7423
p.V141I
TCGA-A5-A0G2
UCEC
TCGA
VPTTT
DEG_SPOP_SBC_1
0.0833
p.V141I
TCGA-AZ-6598
COAD
TCGA
VPTTT
DEG_SPOP_SBC_1
0.0833
p.V141I
TCGA-D1-A0ZO
UCEC
TCGA
VPTTT
DEG_SPOP_SBC_1
0.0833
p.V141I
DO10276
COAD
ICGC
VPTTT
DEG_SPOP_SBC_1
0.0833
p.V141I
DO233205
GACA
ICGC
VPTTT
DEG_SPOP_SBC_1
0.0833
p.V141I
DO41927
UCEC
ICGC
VPTTT
DEG_SPOP_SBC_1
0.0833
p.V141I
DO41235
UCEC
ICGC
VPTTT
DEG_SPOP_SBC_1
0.0833
p.T140I
TCGA-B0-4698
KIRC
TCGA
VPTTT
DEG_SPOP_SBC_1
0.0556
p.T140I
DO20368
KIRC
ICGC
VPTTT
DEG_SPOP_SBC_1
0.0556
p.T154M
TCGA-D5-6930
COAD
TCGA
VPTTT
DEG_SPOP_SBC_1
0.7423
p.T154M
DO10550
COAD
ICGC
VPTTT
DEG_SPOP_SBC_1
0.7423
p.T154M
SIDM02016
Colorectal Carcinoma
GDSC
VPTTT
DEG_SPOP_SBC_1
0.7423
p.M158T
DO224820
COCA
ICGC
VPTTT
DEG_SPOP_SBC_1
0.2222
p.M158T
DO52361
LUSC
ICGC
VPTTT
DEG_SPOP_SBC_1
0.2222
p.T154K
DO229006
LICA
ICGC
VPTTT
DEG_SPOP_SBC_1
0.7306
p.M158I
DO229272
THCA
ICGC
VPTTT
DEG_SPOP_SBC_1
0.2222
p.M158I
DO229245
THCA
ICGC
VPTTT
DEG_SPOP_SBC_1
0.2222
p.T160N
SIDM00700
Non-Small Cell Lung Carcinoma
GDSC
VPTTT
DEG_SPOP_SBC_1
0.1667
p.T160N
NCI-H2135
lung
COSMIC
VPTTT
DEG_SPOP_SBC_1
0.1667
p.T155N
SIDM00700
Non-Small Cell Lung Carcinoma
GDSC
VPTTT
DEG_SPOP_SBC_1
0.3056
p.T155N
ACH-001363
Lung Cancer
CCLE
VPTTT
DEG_SPOP_SBC_1
0.3056
p.T155N
NCI-H2135
lung
COSMIC
VPTTT
DEG_SPOP_SBC_1
0.3056
p.T142M
SIDM00837
Colorectal Carcinoma
GDSC
VPTTT
DEG_SPOP_SBC_1
0.1111
p.T142M
ACH-000958
Colon/Colorectal Cancer
CCLE
VPTTT
DEG_SPOP_SBC_1
0.1111
p.T142M
SW48
large_intestine
COSMIC
VPTTT
DEG_SPOP_SBC_1
0.1111
p.T155P
ACH-001433
Sarcoma
CCLE
VPTTT
DEG_SPOP_SBC_1
0.3056
Drug responses associated with HAVCR1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75829
Leukocyte cell-derived chemotaxin 1
DEG_SPOP_SBC_1
221:225
VPTTT
SPOP
0.9724
More...
P22105
Tenascin-X
DEG_SPOP_SBC_1
2834:2838
VPTTT
SPOP
0.8867
More...
P98171
Rho GTPase-activating protein 4
DEG_SPOP_SBC_1
200:204
VPTTT
SPOP
0.9213
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
5806:5810
VPTTT
SPOP
0.9863
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
11618:11622
VPTTT
SPOP
0.7076
More...
Q96D42
Hepatitis A virus cellular receptor 1
DEG_SPOP_SBC_1
150:154
VPTTT
SPOP
0.9885
More...
Q96D42
Hepatitis A virus cellular receptor 1
DEG_SPOP_SBC_1
161:165
VPTTT
SPOP
0.986
More...
Q96D42
Hepatitis A virus cellular receptor 1
DEG_SPOP_SBC_1
190:194
VPTTT
SPOP
0.9092
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
2051:2055
VPTTT
SPOP
0.9951
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
3308:3312
VPTTT
SPOP
0.993
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
3865:3869
VPTTT
SPOP
0.9882
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
4593:4597
VPTTT
SPOP
0.9609
More...
Q9UL68
Myelin transcription factor 1-like protein
DEG_SPOP_SBC_1
625:629
VPTTT
SPOP
0.8307
More...
Q9UPN9
E3 ubiquitin-protein ligase TRIM33
DEG_SPOP_SBC_1
543:547
VPTTT
SPOP
0.7751
More...
O94880
PHD finger protein 14
DEG_SPOP_SBC_1
166:170
VPTTT
SPOP
0.991
More...
Q8WW62
Transmembrane emp24 domain-containing protein 6
DEG_SPOP_SBC_1
229:233
VPTTT
SPOP
0.7106
More...