DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VQSSS
Uniprot ID:
Q8TCU4
Source protein:
Alstrom syndrome protein 1
Source gene:
ALMS1
Class:
DEG_SPOP_SBC_1
Location:
759:763
E3 ligase:
SPOP
DEGRON score:
0.9855
ASA_SCORE:
87.7
COIL:
0.9002
CONS_SCORE:
0.2738
DSS_SCORE:
0.6471
HELIX:
0.0266
FCONS_SCORE:
1.0018
RIG_SCORE:
0.6644
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S762A
TCGA-AP-A056
UCEC
TCGA
VQSSS
DEG_SPOP_SBC_1
0.7588
p.S762A
DO43971
UCEC
ICGC
VQSSS
DEG_SPOP_SBC_1
0.7588
p.T753N
TCGA-DU-6392
LGG
TCGA
VQSSS
DEG_SPOP_SBC_1
0.2778
p.T753N
DO22237
LGG
ICGC
VQSSS
DEG_SPOP_SBC_1
0.2778
p.P769S
TCGA-EE-A3AF
SKCM
TCGA
VQSSS
DEG_SPOP_SBC_1
0.6111
p.P769S
DO50946
LICA
ICGC
VQSSS
DEG_SPOP_SBC_1
0.6111
p.P769S
DO37911
SKCM
ICGC
VQSSS
DEG_SPOP_SBC_1
0.6111
p.S764L
TCGA-G2-A3VY
BLCA
TCGA
VQSSS
DEG_SPOP_SBC_1
0.75
p.S764L
DO590
BLCA
ICGC
VQSSS
DEG_SPOP_SBC_1
0.75
p.S762F
TCGA-IR-A3LH
CESC
TCGA
VQSSS
DEG_SPOP_SBC_1
0.7982
p.S762F
DO44381
CESC
ICGC
VQSSS
DEG_SPOP_SBC_1
0.7982
p.S761T
DO222643
BTCA
ICGC
VQSSS
DEG_SPOP_SBC_1
0.6005
p.S761T
ACH-000582
Skin Cancer
CCLE
VQSSS
DEG_SPOP_SBC_1
0.6005
p.K757E
DO15294
HNSC
ICGC
VQSSS
DEG_SPOP_SBC_1
0.2778
p.L760Q
DO44828
LICA
ICGC
VQSSS
DEG_SPOP_SBC_1
0.7765
p.E772D
DO24740
LUAD
ICGC
VQSSS
DEG_SPOP_SBC_1
0.0833
p.S762T
SIDM01483
Melanoma
GDSC
VQSSS
DEG_SPOP_SBC_1
0.6005
p.S762T
COLO-741
large_intestine
COSMIC
VQSSS
DEG_SPOP_SBC_1
0.6005
p.Q757R
MCC26
skin
COSMIC
VQSSS
DEG_SPOP_SBC_1
0.2778
Drug responses associated with ALMS1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VQSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14917
Protocadherin-17
DEG_SPOP_SBC_1
873:877
VQSSS
SPOP
0.8664
More...
P49792
E3 SUMO-protein ligase RanBP2
DEG_SPOP_SBC_1
926:930
VQSSS
SPOP
0.9967
More...
Q6ZW76
Ankyrin repeat and SAM domain-containing protein 3
DEG_SPOP_SBC_1
348:352
VQSSS
SPOP
0.9789
More...
Q8TCU4
Alstrom syndrome protein 1
DEG_SPOP_SBC_1
759:763
VQSSS
SPOP
0.9855
More...
Q8TCU4
Alstrom syndrome protein 1
DEG_SPOP_SBC_1
1045:1049
VQSSS
SPOP
0.9519
More...
Q96QF7
Germ cell nuclear acidic protein
DEG_SPOP_SBC_1
25:29
VQSSS
SPOP
0.9667
More...
Q9H2G4
Testis-specific Y-encoded-like protein 2
DEG_SPOP_SBC_1
135:139
VQSSS
SPOP
0.7915
More...
Q9NWH9
SAFB-like transcription modulator
DEG_SPOP_SBC_1
785:789
VQSSS
SPOP
0.9787
More...
Q9NYQ7
Cadherin EGF LAG seven-pass G-type receptor 3
DEG_SPOP_SBC_1
3261:3265
VQSSS
SPOP
0.715
More...
Q9UKI8
Serine/threonine-protein kinase tousled-like 1
DEG_SPOP_SBC_1
3:7
VQSSS
SPOP
0.6227
More...
Q9Y613
FH1/FH2 domain-containing protein 1
DEG_SPOP_SBC_1
1074:1078
VQSSS
SPOP
0.7081
More...
Q8WUF8
Cotranscriptional regulator FAM172A
DEG_SPOP_SBC_1
213:217
VQSSS
SPOP
0.9808
More...
Q2KHR3
Glutamine and serine-rich protein 1
DEG_SPOP_SBC_1
519:523
VQSSS
SPOP
0.9359
More...
Q6ZS46
Putative uncharacterized protein FLJ45840
DEG_SPOP_SBC_1
16:20
VQSSS
SPOP
0.8662
More...