DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VQSSS
Uniprot ID:
Q9H2G4
Source protein:
Testis-specific Y-encoded-like protein 2
Source gene:
TSPYL2
Class:
DEG_SPOP_SBC_1
Location:
135:139
E3 ligase:
SPOP
DEGRON score:
0.7915
ASA_SCORE:
74.74
COIL:
0.6676
CONS_SCORE:
0.2323
DSS_SCORE:
0.4036
HELIX:
0.1684
FCONS_SCORE:
0.9854
RIG_SCORE:
0.7454
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E129K
TCGA-GF-A6C8
SKCM
TCGA
VQSSS
DEG_SPOP_SBC_1
0.1667
p.E129K
DO48765
SKCM
ICGC
VQSSS
DEG_SPOP_SBC_1
0.1667
p.A145S
DO229029
LICA
ICGC
VQSSS
DEG_SPOP_SBC_1
0.1667
p.A145T
DO45299
LIRI
ICGC
VQSSS
DEG_SPOP_SBC_1
0.1667
p.G125V
SIDM00545
Melanoma
GDSC
VQSSS
DEG_SPOP_SBC_1
0.0556
p.G125V
SIDM00915
Small Cell Lung Carcinoma
GDSC
VQSSS
DEG_SPOP_SBC_1
0.0556
p.G125V
NCI-H378
lung
COSMIC
VQSSS
DEG_SPOP_SBC_1
0.0556
p.G125V
Mewo
skin
COSMIC
VQSSS
DEG_SPOP_SBC_1
0.0556
p.T148I
SIDM01187
Breast Carcinoma
GDSC
VQSSS
DEG_SPOP_SBC_1
0.0833
p.T148I
UACC-812
breast
COSMIC
VQSSS
DEG_SPOP_SBC_1
0.0833
Drug responses associated with TSPYL2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VQSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14917
Protocadherin-17
DEG_SPOP_SBC_1
873:877
VQSSS
SPOP
0.8664
More...
P49792
E3 SUMO-protein ligase RanBP2
DEG_SPOP_SBC_1
926:930
VQSSS
SPOP
0.9967
More...
Q6ZW76
Ankyrin repeat and SAM domain-containing protein 3
DEG_SPOP_SBC_1
348:352
VQSSS
SPOP
0.9789
More...
Q8TCU4
Alstrom syndrome protein 1
DEG_SPOP_SBC_1
759:763
VQSSS
SPOP
0.9855
More...
Q8TCU4
Alstrom syndrome protein 1
DEG_SPOP_SBC_1
1045:1049
VQSSS
SPOP
0.9519
More...
Q96QF7
Germ cell nuclear acidic protein
DEG_SPOP_SBC_1
25:29
VQSSS
SPOP
0.9667
More...
Q9H2G4
Testis-specific Y-encoded-like protein 2
DEG_SPOP_SBC_1
135:139
VQSSS
SPOP
0.7915
More...
Q9NWH9
SAFB-like transcription modulator
DEG_SPOP_SBC_1
785:789
VQSSS
SPOP
0.9787
More...
Q9NYQ7
Cadherin EGF LAG seven-pass G-type receptor 3
DEG_SPOP_SBC_1
3261:3265
VQSSS
SPOP
0.715
More...
Q9UKI8
Serine/threonine-protein kinase tousled-like 1
DEG_SPOP_SBC_1
3:7
VQSSS
SPOP
0.6227
More...
Q9Y613
FH1/FH2 domain-containing protein 1
DEG_SPOP_SBC_1
1074:1078
VQSSS
SPOP
0.7081
More...
Q8WUF8
Cotranscriptional regulator FAM172A
DEG_SPOP_SBC_1
213:217
VQSSS
SPOP
0.9808
More...
Q2KHR3
Glutamine and serine-rich protein 1
DEG_SPOP_SBC_1
519:523
VQSSS
SPOP
0.9359
More...
Q6ZS46
Putative uncharacterized protein FLJ45840
DEG_SPOP_SBC_1
16:20
VQSSS
SPOP
0.8662
More...