DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VQSSS
Uniprot ID:
Q8WUF8
Source protein:
Cotranscriptional regulator FAM172A
Source gene:
FAM172A
Class:
DEG_SPOP_SBC_1
Location:
213:217
E3 ligase:
SPOP
DEGRON score:
0.9808
ASA_SCORE:
63.72
COIL:
0.6992
CONS_SCORE:
0.282
DSS_SCORE:
0.6009
HELIX:
0.0574
FCONS_SCORE:
0.787
RIG_SCORE:
0.623
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D218N
TCGA-29-1688
OV
TCGA
VQSSS
DEG_SPOP_SBC_1
0.3056
p.D218N
DO28026
OV
ICGC
VQSSS
DEG_SPOP_SBC_1
0.3056
p.Q214L
TCGA-BF-AAOX
SKCM
TCGA
VQSSS
DEG_SPOP_SBC_1
0.6654
p.Q214L
DO223907
SKCM
ICGC
VQSSS
DEG_SPOP_SBC_1
0.6654
p.D218H
TCGA-C5-A7UH
CESC
TCGA
VQSSS
DEG_SPOP_SBC_1
0.3056
p.D218H
TCGA-EY-A1GS
UCEC
TCGA
VQSSS
DEG_SPOP_SBC_1
0.3056
p.D218H
DO49891
CESC
ICGC
VQSSS
DEG_SPOP_SBC_1
0.3056
p.D218H
DO43162
UCEC
ICGC
VQSSS
DEG_SPOP_SBC_1
0.3056
p.R227Q
TCGA-CM-6677
COAD
TCGA
VQSSS
DEG_SPOP_SBC_1
0.0556
p.R227Q
DO8570
COAD
ICGC
VQSSS
DEG_SPOP_SBC_1
0.0556
p.R227W
DO222507
COCA
ICGC
VQSSS
DEG_SPOP_SBC_1
0.0556
p.E225K
SIDM00190
Melanoma
GDSC
VQSSS
DEG_SPOP_SBC_1
0.1111
p.E225K
CP66-MEL
skin
COSMIC
VQSSS
DEG_SPOP_SBC_1
0.1111
p.V213I
SIDM00238
Ovarian Carcinoma
GDSC
VQSSS
DEG_SPOP_SBC_1
0.7076
p.V213I
OVK-18
ovary
COSMIC
VQSSS
DEG_SPOP_SBC_1
0.7076
Drug responses associated with FAM172A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VQSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14917
Protocadherin-17
DEG_SPOP_SBC_1
873:877
VQSSS
SPOP
0.8664
More...
P49792
E3 SUMO-protein ligase RanBP2
DEG_SPOP_SBC_1
926:930
VQSSS
SPOP
0.9967
More...
Q6ZW76
Ankyrin repeat and SAM domain-containing protein 3
DEG_SPOP_SBC_1
348:352
VQSSS
SPOP
0.9789
More...
Q8TCU4
Alstrom syndrome protein 1
DEG_SPOP_SBC_1
759:763
VQSSS
SPOP
0.9855
More...
Q8TCU4
Alstrom syndrome protein 1
DEG_SPOP_SBC_1
1045:1049
VQSSS
SPOP
0.9519
More...
Q96QF7
Germ cell nuclear acidic protein
DEG_SPOP_SBC_1
25:29
VQSSS
SPOP
0.9667
More...
Q9H2G4
Testis-specific Y-encoded-like protein 2
DEG_SPOP_SBC_1
135:139
VQSSS
SPOP
0.7915
More...
Q9NWH9
SAFB-like transcription modulator
DEG_SPOP_SBC_1
785:789
VQSSS
SPOP
0.9787
More...
Q9NYQ7
Cadherin EGF LAG seven-pass G-type receptor 3
DEG_SPOP_SBC_1
3261:3265
VQSSS
SPOP
0.715
More...
Q9UKI8
Serine/threonine-protein kinase tousled-like 1
DEG_SPOP_SBC_1
3:7
VQSSS
SPOP
0.6227
More...
Q9Y613
FH1/FH2 domain-containing protein 1
DEG_SPOP_SBC_1
1074:1078
VQSSS
SPOP
0.7081
More...
Q8WUF8
Cotranscriptional regulator FAM172A
DEG_SPOP_SBC_1
213:217
VQSSS
SPOP
0.9808
More...
Q2KHR3
Glutamine and serine-rich protein 1
DEG_SPOP_SBC_1
519:523
VQSSS
SPOP
0.9359
More...
Q6ZS46
Putative uncharacterized protein FLJ45840
DEG_SPOP_SBC_1
16:20
VQSSS
SPOP
0.8662
More...