DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VVSSS
Uniprot ID:
O60279
Source protein:
Sushi domain-containing protein 5
Source gene:
SUSD5
Class:
DEG_SPOP_SBC_1
Location:
362:366
E3 ligase:
SPOP
DEGRON score:
0.9462
ASA_SCORE:
72.36
COIL:
0.785
CONS_SCORE:
0.6584
DSS_SCORE:
0.5938
HELIX:
0.046
FCONS_SCORE:
0.9811
RIG_SCORE:
0.6899
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K353M
TCGA-39-5031
LUSC
TCGA
VVSSS
DEG_SPOP_SBC_1
0.1944
p.K353M
DO26526
LUSC
ICGC
VVSSS
DEG_SPOP_SBC_1
0.1944
p.V362L
TCGA-A3-3374
KIRC
TCGA
VVSSS
DEG_SPOP_SBC_1
0.6765
p.P375H
TCGA-A5-A0G1
UCEC
TCGA
VVSSS
DEG_SPOP_SBC_1
0.0833
p.P375H
TCGA-G7-6797
KIRP
TCGA
VVSSS
DEG_SPOP_SBC_1
0.0833
p.P375H
DO20917
KIRP
ICGC
VVSSS
DEG_SPOP_SBC_1
0.0833
p.P375H
DO42472
UCEC
ICGC
VVSSS
DEG_SPOP_SBC_1
0.0833
p.D360Y
TCGA-A5-A1OF
UCEC
TCGA
VVSSS
DEG_SPOP_SBC_1
0.2778
p.D360Y
DO42568
UCEC
ICGC
VVSSS
DEG_SPOP_SBC_1
0.2778
p.P375S
DO222407
MELA
ICGC
VVSSS
DEG_SPOP_SBC_1
0.0833
p.A358T
SIDM00889
Cervical Carcinoma
GDSC
VVSSS
DEG_SPOP_SBC_1
0.2222
p.A358T
ACH-001333
Cervical Cancer
CCLE
VVSSS
DEG_SPOP_SBC_1
0.2222
p.A358T
C-33-A
cervix
COSMIC
VVSSS
DEG_SPOP_SBC_1
0.2222
p.S369F
SIDM01398
Melanoma
GDSC
VVSSS
DEG_SPOP_SBC_1
0.25
p.S369F
ACH-000661
Skin Cancer
CCLE
VVSSS
DEG_SPOP_SBC_1
0.25
Drug responses associated with SUSD5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VVSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P12035
Keratin, type II cytoskeletal 3
DEG_SPOP_SBC_1
525:529
VVSSS
SPOP
0.6552
More...
P41180
Extracellular calcium-sensing receptor
DEG_SPOP_SBC_1
1055:1059
VVSSS
SPOP
0.8121
More...
Q14525
Keratin, type I cuticular Ha3-II
DEG_SPOP_SBC_1
258:262
VVSSS
SPOP
0.5895
More...
Q5UIP0
Telomere-associated protein RIF1
DEG_SPOP_SBC_1
1196:1200
VVSSS
SPOP
0.8866
More...
Q8NDX5
Polyhomeotic-like protein 3
DEG_SPOP_SBC_1
197:201
VVSSS
SPOP
0.913
More...
Q96JH7
Deubiquitinating protein VCPIP1
DEG_SPOP_SBC_1
1143:1147
VVSSS
SPOP
0.9956
More...
Q9H2K2
Poly [ADP-ribose] polymerase tankyrase-2
DEG_SPOP_SBC_1
854:858
VVSSS
SPOP
0.9829
More...
Q9P243
Zinc finger protein ZFAT
DEG_SPOP_SBC_1
581:585
VVSSS
SPOP
0.9599
More...
Q9P2N6
KAT8 regulatory NSL complex subunit 3
DEG_SPOP_SBC_1
715:719
VVSSS
SPOP
0.9927
More...
O60279
Sushi domain-containing protein 5
DEG_SPOP_SBC_1
362:366
VVSSS
SPOP
0.9462
More...
Q96K58
Zinc finger protein 668
DEG_SPOP_SBC_1
402:406
VVSSS
SPOP
0.9427
More...
Q9BQN1
Protein FAM83C
DEG_SPOP_SBC_1
376:380
VVSSS
SPOP
0.9887
More...