DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VVSSS
Uniprot ID:
Q9P2N6
Source protein:
KAT8 regulatory NSL complex subunit 3
Source gene:
KANSL3
Class:
DEG_SPOP_SBC_1
Location:
715:719
E3 ligase:
SPOP
DEGRON score:
0.9927
ASA_SCORE:
84.5
COIL:
0.9326
CONS_SCORE:
0.389
DSS_SCORE:
0.4369
HELIX:
0.0252
FCONS_SCORE:
0.9258
RIG_SCORE:
0.653
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A708D
TCGA-D3-A2J8
SKCM
TCGA
VVSSS
DEG_SPOP_SBC_1
0.1389
p.A708D
DO37778
SKCM
ICGC
VVSSS
DEG_SPOP_SBC_1
0.1389
p.Q726E
TCGA-D8-A27L
BRCA
TCGA
VVSSS
DEG_SPOP_SBC_1
0.1389
p.Q726E
DO2180
BRCA
ICGC
VVSSS
DEG_SPOP_SBC_1
0.1389
p.P711S
TCGA-FW-A3TU
SKCM
TCGA
VVSSS
DEG_SPOP_SBC_1
0.2222
p.P711S
DO37441
SKCM
ICGC
VVSSS
DEG_SPOP_SBC_1
0.2222
p.P716Q
DO229019
LICA
ICGC
VVSSS
DEG_SPOP_SBC_1
0.7035
p.R705C
SIDM00620
Glioblastoma
GDSC
VVSSS
DEG_SPOP_SBC_1
0.0556
p.R705C
SIDM01518
Oral Cavity Carcinoma
GDSC
VVSSS
DEG_SPOP_SBC_1
0.0556
p.A718T
SIDM00882
Breast Carcinoma
GDSC
VVSSS
DEG_SPOP_SBC_1
0.7139
p.G727D
SIDM01059
Melanoma
GDSC
VVSSS
DEG_SPOP_SBC_1
0.1111
p.G727D
ACH-000915
Skin Cancer
CCLE
VVSSS
DEG_SPOP_SBC_1
0.1111
p.G727D
IPC-298
skin
COSMIC
VVSSS
DEG_SPOP_SBC_1
0.1111
p.S714P
ACH-000977
lymph_node
CCLE
VVSSS
DEG_SPOP_SBC_1
0.3056
p.S714P
LNCaP-Clone-FGC
prostate
COSMIC
VVSSS
DEG_SPOP_SBC_1
0.3056
Drug responses associated with KANSL3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VVSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P12035
Keratin, type II cytoskeletal 3
DEG_SPOP_SBC_1
525:529
VVSSS
SPOP
0.6552
More...
P41180
Extracellular calcium-sensing receptor
DEG_SPOP_SBC_1
1055:1059
VVSSS
SPOP
0.8121
More...
Q14525
Keratin, type I cuticular Ha3-II
DEG_SPOP_SBC_1
258:262
VVSSS
SPOP
0.5895
More...
Q5UIP0
Telomere-associated protein RIF1
DEG_SPOP_SBC_1
1196:1200
VVSSS
SPOP
0.8866
More...
Q8NDX5
Polyhomeotic-like protein 3
DEG_SPOP_SBC_1
197:201
VVSSS
SPOP
0.913
More...
Q96JH7
Deubiquitinating protein VCPIP1
DEG_SPOP_SBC_1
1143:1147
VVSSS
SPOP
0.9956
More...
Q9H2K2
Poly [ADP-ribose] polymerase tankyrase-2
DEG_SPOP_SBC_1
854:858
VVSSS
SPOP
0.9829
More...
Q9P243
Zinc finger protein ZFAT
DEG_SPOP_SBC_1
581:585
VVSSS
SPOP
0.9599
More...
Q9P2N6
KAT8 regulatory NSL complex subunit 3
DEG_SPOP_SBC_1
715:719
VVSSS
SPOP
0.9927
More...
O60279
Sushi domain-containing protein 5
DEG_SPOP_SBC_1
362:366
VVSSS
SPOP
0.9462
More...
Q96K58
Zinc finger protein 668
DEG_SPOP_SBC_1
402:406
VVSSS
SPOP
0.9427
More...
Q9BQN1
Protein FAM83C
DEG_SPOP_SBC_1
376:380
VVSSS
SPOP
0.9887
More...