DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VVSSS
Uniprot ID:
Q96K58
Source protein:
Zinc finger protein 668
Source gene:
ZNF668
Class:
DEG_SPOP_SBC_1
Location:
402:406
E3 ligase:
SPOP
DEGRON score:
0.9427
ASA_SCORE:
67.9
COIL:
0.7744
CONS_SCORE:
0.7395
DSS_SCORE:
0.3554
HELIX:
0.0918
FCONS_SCORE:
0.9446
RIG_SCORE:
0.727
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A397S
TCGA-49-AAR3
LUAD
TCGA
VVSSS
DEG_SPOP_SBC_1
0.1944
p.A400P
TCGA-CK-4951
COAD
TCGA
VVSSS
DEG_SPOP_SBC_1
0.2778
p.G393R
TCGA-DF-A2KN
UCEC
TCGA
VVSSS
DEG_SPOP_SBC_1
0.0833
p.S410L
TCGA-E2-A15H
BRCA
TCGA
VVSSS
DEG_SPOP_SBC_1
0.2222
p.H393Y
DO37778
SKCM
ICGC
VVSSS
DEG_SPOP_SBC_1
0.0833
p.C394Y
DO222381
STAD
ICGC
VVSSS
DEG_SPOP_SBC_1
0.1111
p.A396T
DO48172
UCEC
ICGC
VVSSS
DEG_SPOP_SBC_1
0.1667
p.R408G
DO223282
UCEC
ICGC
VVSSS
DEG_SPOP_SBC_1
0.2778
p.K399T
DO41211
UCEC
ICGC
VVSSS
DEG_SPOP_SBC_1
0.3611
p.R413H
SIDM01016
T-Lymphoblastic Leukemia
GDSC
VVSSS
DEG_SPOP_SBC_1
0.1389
p.R413H
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
VVSSS
DEG_SPOP_SBC_1
0.1389
p.A395V
SIDM01233
Colorectal Carcinoma
GDSC
VVSSS
DEG_SPOP_SBC_1
0.1389
p.A395V
C2BBe1
large_intestine
COSMIC
VVSSS
DEG_SPOP_SBC_1
0.1389
p.R399H
SIDM01413
Oral Cavity Carcinoma
GDSC
VVSSS
DEG_SPOP_SBC_1
0.3611
p.K399R
ACH-000995
Leukemia
CCLE
VVSSS
DEG_SPOP_SBC_1
0.3611
p.K399R
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
VVSSS
DEG_SPOP_SBC_1
0.3611
Drug responses associated with ZNF668 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VVSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P12035
Keratin, type II cytoskeletal 3
DEG_SPOP_SBC_1
525:529
VVSSS
SPOP
0.6552
More...
P41180
Extracellular calcium-sensing receptor
DEG_SPOP_SBC_1
1055:1059
VVSSS
SPOP
0.8121
More...
Q14525
Keratin, type I cuticular Ha3-II
DEG_SPOP_SBC_1
258:262
VVSSS
SPOP
0.5895
More...
Q5UIP0
Telomere-associated protein RIF1
DEG_SPOP_SBC_1
1196:1200
VVSSS
SPOP
0.8866
More...
Q8NDX5
Polyhomeotic-like protein 3
DEG_SPOP_SBC_1
197:201
VVSSS
SPOP
0.913
More...
Q96JH7
Deubiquitinating protein VCPIP1
DEG_SPOP_SBC_1
1143:1147
VVSSS
SPOP
0.9956
More...
Q9H2K2
Poly [ADP-ribose] polymerase tankyrase-2
DEG_SPOP_SBC_1
854:858
VVSSS
SPOP
0.9829
More...
Q9P243
Zinc finger protein ZFAT
DEG_SPOP_SBC_1
581:585
VVSSS
SPOP
0.9599
More...
Q9P2N6
KAT8 regulatory NSL complex subunit 3
DEG_SPOP_SBC_1
715:719
VVSSS
SPOP
0.9927
More...
O60279
Sushi domain-containing protein 5
DEG_SPOP_SBC_1
362:366
VVSSS
SPOP
0.9462
More...
Q96K58
Zinc finger protein 668
DEG_SPOP_SBC_1
402:406
VVSSS
SPOP
0.9427
More...
Q9BQN1
Protein FAM83C
DEG_SPOP_SBC_1
376:380
VVSSS
SPOP
0.9887
More...