DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VVSSS
Uniprot ID:
P41180
Source protein:
Extracellular calcium-sensing receptor
Source gene:
CASR
Class:
DEG_SPOP_SBC_1
Location:
1055:1059
E3 ligase:
SPOP
DEGRON score:
0.8121
ASA_SCORE:
71.44
COIL:
0.7066
CONS_SCORE:
0.259
DSS_SCORE:
0.4902
HELIX:
0.093
FCONS_SCORE:
0.967
RIG_SCORE:
0.7481
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V1066M
TCGA-05-5428
LUAD
TCGA
VVSSS
DEG_SPOP_SBC_1
0.1389
p.V1066M
SIDM00118
Colorectal Carcinoma
GDSC
VVSSS
DEG_SPOP_SBC_1
0.1389
p.V1066M
HCC2998
large_intestine
COSMIC
VVSSS
DEG_SPOP_SBC_1
0.1389
p.A1063T
TCGA-A5-A0G2
UCEC
TCGA
VVSSS
DEG_SPOP_SBC_1
0.2222
p.R1051Q
TCGA-AB-2806
LAML
TCGA
VVSSS
DEG_SPOP_SBC_1
0.2222
p.P1045S
TCGA-E6-A1LX
UCEC
TCGA
VVSSS
DEG_SPOP_SBC_1
0.0556
p.P1045S
SIDM00207
Glioblastoma
GDSC
VVSSS
DEG_SPOP_SBC_1
0.0556
p.P1045S
D-542MG
central_nervous_system
COSMIC
VVSSS
DEG_SPOP_SBC_1
0.0556
p.P1045A
TCGA-F7-A624
HNSC
TCGA
VVSSS
DEG_SPOP_SBC_1
0.0556
p.E1053K
TCGA-IQ-A61H
HNSC
TCGA
VVSSS
DEG_SPOP_SBC_1
0.2778
p.G1066R
DO816
BLCA
ICGC
VVSSS
DEG_SPOP_SBC_1
0.1389
p.S1051P
DO222755
COCA
ICGC
VVSSS
DEG_SPOP_SBC_1
0.2222
p.V1055A
DO233917
GACA
ICGC
VVSSS
DEG_SPOP_SBC_1
0.5825
p.G1068C
DO229037
LICA
ICGC
VVSSS
DEG_SPOP_SBC_1
0.0833
p.E1045K
DO50924
LICA
ICGC
VVSSS
DEG_SPOP_SBC_1
0.0556
p.S1061G
DO23078
LIHC
ICGC
VVSSS
DEG_SPOP_SBC_1
0.2778
p.S1061N
DO24100
LUAD
ICGC
VVSSS
DEG_SPOP_SBC_1
0.2778
p.V1056M
DO24005
LUAD
ICGC
VVSSS
DEG_SPOP_SBC_1
0.6097
p.V1056M
ACH-001081
Colon/Colorectal Cancer
CCLE
VVSSS
DEG_SPOP_SBC_1
0.6097
p.V1056M
HCC2998
large_intestine
COSMIC
VVSSS
DEG_SPOP_SBC_1
0.6097
p.S1065G
DO42023
UCEC
ICGC
VVSSS
DEG_SPOP_SBC_1
0.1667
p.A1053T
DO41235
UCEC
ICGC
VVSSS
DEG_SPOP_SBC_1
0.2778
p.P1057H
SIDM01387
Small Cell Lung Carcinoma
GDSC
VVSSS
DEG_SPOP_SBC_1
0.7694
p.P1047H
ACH-000921
Lung Cancer
CCLE
VVSSS
DEG_SPOP_SBC_1
0.1111
Drug responses associated with CASR mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VVSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P12035
Keratin, type II cytoskeletal 3
DEG_SPOP_SBC_1
525:529
VVSSS
SPOP
0.6552
More...
P41180
Extracellular calcium-sensing receptor
DEG_SPOP_SBC_1
1055:1059
VVSSS
SPOP
0.8121
More...
Q14525
Keratin, type I cuticular Ha3-II
DEG_SPOP_SBC_1
258:262
VVSSS
SPOP
0.5895
More...
Q5UIP0
Telomere-associated protein RIF1
DEG_SPOP_SBC_1
1196:1200
VVSSS
SPOP
0.8866
More...
Q8NDX5
Polyhomeotic-like protein 3
DEG_SPOP_SBC_1
197:201
VVSSS
SPOP
0.913
More...
Q96JH7
Deubiquitinating protein VCPIP1
DEG_SPOP_SBC_1
1143:1147
VVSSS
SPOP
0.9956
More...
Q9H2K2
Poly [ADP-ribose] polymerase tankyrase-2
DEG_SPOP_SBC_1
854:858
VVSSS
SPOP
0.9829
More...
Q9P243
Zinc finger protein ZFAT
DEG_SPOP_SBC_1
581:585
VVSSS
SPOP
0.9599
More...
Q9P2N6
KAT8 regulatory NSL complex subunit 3
DEG_SPOP_SBC_1
715:719
VVSSS
SPOP
0.9927
More...
O60279
Sushi domain-containing protein 5
DEG_SPOP_SBC_1
362:366
VVSSS
SPOP
0.9462
More...
Q96K58
Zinc finger protein 668
DEG_SPOP_SBC_1
402:406
VVSSS
SPOP
0.9427
More...
Q9BQN1
Protein FAM83C
DEG_SPOP_SBC_1
376:380
VVSSS
SPOP
0.9887
More...