DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VVSSS
Uniprot ID:
Q14525
Source protein:
Keratin, type I cuticular Ha3-II
Source gene:
KRT33B
Class:
DEG_SPOP_SBC_1
Location:
258:262
E3 ligase:
SPOP
DEGRON score:
0.5895
ASA_SCORE:
79.28
COIL:
0.3968
CONS_SCORE:
0.6864
DSS_SCORE:
0.3322
HELIX:
0.5982
FCONS_SCORE:
1.1692
RIG_SCORE:
0.773
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A248T
TCGA-CQ-6223
HNSC
TCGA
VVSSS
DEG_SPOP_SBC_1
0.0556
p.A248T
DO15318
HNSC
ICGC
VVSSS
DEG_SPOP_SBC_1
0.0556
p.A248T
SIDM00118
Colorectal Carcinoma
GDSC
VVSSS
DEG_SPOP_SBC_1
0.0556
p.A248T
ACH-001081
Colon/Colorectal Cancer
CCLE
VVSSS
DEG_SPOP_SBC_1
0.0556
p.A248T
HCC2998
large_intestine
COSMIC
VVSSS
DEG_SPOP_SBC_1
0.0556
p.E252K
TCGA-FR-A729
SKCM
TCGA
VVSSS
DEG_SPOP_SBC_1
0.1667
p.E252K
DO48618
SKCM
ICGC
VVSSS
DEG_SPOP_SBC_1
0.1667
p.T249M
DO233715
GACA
ICGC
VVSSS
DEG_SPOP_SBC_1
0.0833
p.S262L
DO218863
SKCA
ICGC
VVSSS
DEG_SPOP_SBC_1
0.7667
p.I272V
DO229264
THCA
ICGC
VVSSS
DEG_SPOP_SBC_1
0.0556
p.A270V
DO229216
THCA
ICGC
VVSSS
DEG_SPOP_SBC_1
0.1111
p.A270V
DO229227
THCA
ICGC
VVSSS
DEG_SPOP_SBC_1
0.1111
p.A270V
SIDM00728
Non-Small Cell Lung Carcinoma
GDSC
VVSSS
DEG_SPOP_SBC_1
0.1111
p.A270V
SIDM01147
Gastric Carcinoma
GDSC
VVSSS
DEG_SPOP_SBC_1
0.1111
p.A270V
SIDM01650
Non-Cancerous
GDSC
VVSSS
DEG_SPOP_SBC_1
0.1111
p.Q266E
DO229248
THCA
ICGC
VVSSS
DEG_SPOP_SBC_1
0.2222
p.Q264H
DO229250
THCA
ICGC
VVSSS
DEG_SPOP_SBC_1
0.2778
p.S261C
SIDM01662
Plasma Cell Myeloma
GDSC
VVSSS
DEG_SPOP_SBC_1
0.7541
p.Y268C
ACH-000300
Kidney Cancer
CCLE
VVSSS
DEG_SPOP_SBC_1
0.6111
Drug responses associated with KRT33B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VVSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P12035
Keratin, type II cytoskeletal 3
DEG_SPOP_SBC_1
525:529
VVSSS
SPOP
0.6552
More...
P41180
Extracellular calcium-sensing receptor
DEG_SPOP_SBC_1
1055:1059
VVSSS
SPOP
0.8121
More...
Q14525
Keratin, type I cuticular Ha3-II
DEG_SPOP_SBC_1
258:262
VVSSS
SPOP
0.5895
More...
Q5UIP0
Telomere-associated protein RIF1
DEG_SPOP_SBC_1
1196:1200
VVSSS
SPOP
0.8866
More...
Q8NDX5
Polyhomeotic-like protein 3
DEG_SPOP_SBC_1
197:201
VVSSS
SPOP
0.913
More...
Q96JH7
Deubiquitinating protein VCPIP1
DEG_SPOP_SBC_1
1143:1147
VVSSS
SPOP
0.9956
More...
Q9H2K2
Poly [ADP-ribose] polymerase tankyrase-2
DEG_SPOP_SBC_1
854:858
VVSSS
SPOP
0.9829
More...
Q9P243
Zinc finger protein ZFAT
DEG_SPOP_SBC_1
581:585
VVSSS
SPOP
0.9599
More...
Q9P2N6
KAT8 regulatory NSL complex subunit 3
DEG_SPOP_SBC_1
715:719
VVSSS
SPOP
0.9927
More...
O60279
Sushi domain-containing protein 5
DEG_SPOP_SBC_1
362:366
VVSSS
SPOP
0.9462
More...
Q96K58
Zinc finger protein 668
DEG_SPOP_SBC_1
402:406
VVSSS
SPOP
0.9427
More...
Q9BQN1
Protein FAM83C
DEG_SPOP_SBC_1
376:380
VVSSS
SPOP
0.9887
More...