Search results: The pahtway p3488 has 61 genes in the original annotation. Currently, there are 47 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
6387CXCL12IRH | PBSF | SCYB12 | SDF1 | TLSF | TPAR1C-X-C motif chemokine ligand 1210q11.1CV:GWAScat
CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
26509MYOFFER1L3myoferlin10q24CV:PGCnp
DNM:Fromer_2014
CompositeSet
120ADD3ADDLadducin 310q25.2CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
150ADRA2AADRA2 | ADRA2R | ADRAR | ALPHA2AAR | ZNF32adrenoceptor alpha 2A10q25.2ADT:Sun_2012
CV:PGCnp
Network
PMID:cooccur
GPCR SIGNALLING
25987TSKUE2IG4 | LRRC54 | TSKtsukushi, small leucine rich proteoglycan11q13.5CV:PGCnp
DMG:Jaffe_2016
11098PRSS23SIG13 | SPUVE | ZSIG13protease, serine 2311q14.1CV:GWASdb
CV:PGCnp
GO_Annotation
5241PGRNR3C3 | PRprogesterone receptor11q22-q23CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
949SCARB1CD36L1 | CLA-1 | CLA1 | HDLQTL6 | SR-BI | SRB1scavenger receptor class B member 112q24.31CV:PGCnp
DMG:Wockner_2014
90627STARD13ARHGAP37 | DLC2 | GT650 | LINC00464StAR related lipid transfer domain containing 1313q13.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
Ascano FMRP targets
5104SERPINA5PAI-3 | PAI3 | PCI | PCI-B | PLANH3 | PROCIserpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 514q32.1CV:PGCnp
DNM:McCarthy_2014
Expression
771CA12CA-XII | CAXII | HsT18816 | T18816carbonic anhydrase XII15q22CV:PGCnp
DMG:Wockner_2014
3480IGF1RCD221 | IGFIR | IGFR | JTK13insulin like growth factor 1 receptor15q26.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
267AMFRGP78 | RNF45autocrine motility factor receptor, E3 ubiquitin protein ligase16q21CV:PGCnp
DMG:Jaffe_2016
4137MAPTDDPAC | FTDP-17 | MAPTL | MSTD | MTBT1 | MTBT2 | PPND | PPP1R103 | TAUmicrotubule associated protein tau17q21.1CV:PGCnp
CV:PheWAS
GO_Annotation
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
3487IGFBP4BP-4 | HT29-IGFBP | IBP4 | IGFBP-4insulin like growth factor binding protein 417q21.2CV:PGCnp
PMID:cooccur
7153TOP2ATOP2 | TP2Atopoisomerase (DNA) II alpha17q21.2CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
5932RBBP8COM1 | CTIP | JWDS | RIM | SAE2 | SCKL2retinoblastoma binding protein 818q11.2CV:PGCnp
DMG:Jaffe_2016
5366PMAIP1APR | NOXAphorbol-12-myristate-13-acetate-induced protein 118q21.32CV:PGCnp
DMG:Jaffe_2016
23254KAZNKAZkazrin, periplakin interacting protein1p36.21CV:GWASdb
CV:PGCnp
DEG:Zhao_2015
5174PDZK1CAP70 | CLAMP | NHERF-3 | NHERF3 | PDZD1PDZ domain containing 11q21CNV:YES
CV:GWAScat
CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
8204NRIP1RIP140nuclear receptor interacting protein 121q11.2CV:PGCnp
DNM:Girard_2011
GO_Annotation
CompositeSet
Darnell FMRP targets
64699TMPRSS3DFNB10 | DFNB8 | ECHOS1 | TADG12transmembrane protease, serine 321q22.3CV:GWASdb
CV:PGCnp
GO_Annotation
8624PSMG1C21LRP | DSCR2 | LRPC21 | PAC-1 | PAC1proteasome (prosome, macropain) assembly chaperone 121q22.3CV:PGCnp
6509SLC1A4ASCT1 | SATT | SPATCCMsolute carrier family 1 member 42p14CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
METABOTROPIC GLUTAMATE RECEPTOR
NEUROTRANSMITTER METABOLISM
4133MAP2MAP2A | MAP2B | MAP2Cmicrotubule associated protein 22q34-q35CV:PGCnp
GR_Ng
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
3667IRS1HIRS-1insulin receptor substrate 12q36CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
DMG:Wockner_2014
DNM:Xu_2012
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
26018LRIG1LIG-1 | LIG1leucine-rich repeats and immunoglobulin-like domains 13p14CV:PGCnp
DMG:Nishioka_2013
Ascano FMRP targets
2317FLNBABP-278 | ABP-280 | AOI | FH1 | FLN-B | FLN1L | LRS1 | SCT | TABP | TAPfilamin B3p14.3Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Ascano FMRP targets
6478SIAH2hSiah2siah E3 ubiquitin protein ligase 23q25CV:PGCnp
PMID:cooccur
22836RHOBTB3-Rho related BTB domain containing 35q15CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
Expression
PMID:cooccur
55374TMCO6PRO1580transmembrane and coiled-coil domains 65q31.3CV:PGCnp
GSMA_I
1836SLC26A2D5S1708 | DTD | DTDST | EDM4 | MST153 | MSTP157solute carrier family 26 member 25q32CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
6659SOX4EVI16SRY-box 46p22.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
54898ELOVL2SSC2ELOVL fatty acid elongase 26p24.2CV:PGCnp
GSMA_I
PMID:cooccur
4602MYBCmyb | c-myb | c-myb_CDS | efgMYB proto-oncogene, transcription factor6q22-q23CV:PGCnp
PMID:cooccur
7164TPD52L1D53tumor protein D52-like 16q22-q23CV:PGCnp
DMG:Wockner_2014
6717SRICP-22 | CP22 | SCN | V19sorcin7q21.1CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
1960EGR3EGR-3 | PILOTearly growth response 38p23-p21Association
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
7071KLF10EGR-alpha | EGRA | TIEG | TIEG1Kruppel-like factor 108q22.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Expression
55638SYBUGOLSYN | OCSYN | SNPHLsyntabulin8q23.2CV:GWASdb
CV:PGCnp
Network
INTRACELLULAR TRAFFICKING
64798DEPTORDEP.6 | DEPDC6DEP domain containing MTOR-interacting protein8q24.12CV:PGCnp
DMG:Jaffe_2016
22882ZHX2AFR1 | RAFzinc fingers and homeoboxes 28q24.13CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
54840APTXAOA | AOA1 | AXA1 | EAOH | EOAHA | FHA-HITaprataxin9p13.3CV:PGCnp
1955MEGF9EGFL5multiple EGF like domains 99q32-q33.3CV:PGCnp
DMG:Jaffe_2016
10439OLFM1AMY | NOE1 | NOELIN1 | OlfAolfactomedin 19q34.3CV:PGCnp
DEG:Maycox_2009
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
6256RXRANR2B1retinoid X receptor alpha9q34.3CV:GWAScat
CV:PGCnp
PMID:cooccur
2717GLAGALAgalactosidase alphaXq22GO_Annotation
PMID:cooccur