DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
AFSSS
Uniprot ID:
O75410
Source protein:
Transforming acidic coiled-coil-containing protein 1
Source gene:
TACC1
Class:
DEG_SPOP_SBC_1
Location:
547:551
E3 ligase:
SPOP
DEGRON score:
0.8702
ASA_SCORE:
71.52
COIL:
0.7828
CONS_SCORE:
0.2265
DSS_SCORE:
0.4523
HELIX:
0.1728
FCONS_SCORE:
0.8284
RIG_SCORE:
0.7218
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A547V
TCGA-AN-A0XP
BRCA
TCGA
AFSSS
DEG_SPOP_SBC_1
0.5825
p.E556K
TCGA-CV-7248
HNSC
TCGA
AFSSS
DEG_SPOP_SBC_1
0.1944
p.G554S
DO36030
PBCA
ICGC
AFSSS
DEG_SPOP_SBC_1
0.25
p.S542F
SIDM00333
Endometrial Carcinoma
GDSC
AFSSS
DEG_SPOP_SBC_1
0.1944
p.S542F
ACH-000988
Endometrial/Uterine Cancer
CCLE
AFSSS
DEG_SPOP_SBC_1
0.1944
p.S542F
MFE-319
endometrium
COSMIC
AFSSS
DEG_SPOP_SBC_1
0.1944
p.P540L
SIDM01059
Melanoma
GDSC
AFSSS
DEG_SPOP_SBC_1
0.1389
p.P540L
ACH-000915
Skin Cancer
CCLE
AFSSS
DEG_SPOP_SBC_1
0.1389
p.P540L
IPC-298
skin
COSMIC
AFSSS
DEG_SPOP_SBC_1
0.1389
p.K560E
SW780
urinary_tract
COSMIC
AFSSS
DEG_SPOP_SBC_1
0.0833
p.T558P
NCI-H2196
lung
COSMIC
AFSSS
DEG_SPOP_SBC_1
0.1389
p.L542F
SKG-IIIa
cervix
COSMIC
AFSSS
DEG_SPOP_SBC_1
0.1944
p.K561E
SW780
urinary_tract
COSMIC
AFSSS
DEG_SPOP_SBC_1
0.0556
p.T557P
NCI-H2196
lung
COSMIC
AFSSS
DEG_SPOP_SBC_1
0.2778
Drug responses associated with TACC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AFSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75132
Zinc finger BED domain-containing protein 4
DEG_SPOP_SBC_1
413:417
AFSSS
SPOP
0.5892
More...
O75410
Transforming acidic coiled-coil-containing protein 1
DEG_SPOP_SBC_1
547:551
AFSSS
SPOP
0.8702
More...
O94823
Phospholipid-transporting ATPase VB
DEG_SPOP_SBC_1
535:539
AFSSS
SPOP
0.6502
More...
P08235
Mineralocorticoid receptor
DEG_SPOP_SBC_1
405:409
AFSSS
SPOP
0.9658
More...
Q14584
Zinc finger protein 266
DEG_SPOP_SBC_1
528:532
AFSSS
SPOP
0.6008
More...
Q8WUY3
Protein prune homolog 2
DEG_SPOP_SBC_1
842:846
AFSSS
SPOP
0.9053
More...
Q9H4D5
Nuclear RNA export factor 3
DEG_SPOP_SBC_1
513:517
AFSSS
SPOP
0.6018
More...
Q9HBZ2
Aryl hydrocarbon receptor nuclear translocator 2
DEG_SPOP_SBC_1
536:540
AFSSS
SPOP
0.9671
More...
Q9Y2K5
R3H domain-containing protein 2
DEG_SPOP_SBC_1
286:290
AFSSS
SPOP
0.8107
More...
Q8IZF4
Adhesion G-protein coupled receptor G5
DEG_SPOP_SBC_1
520:524
AFSSS
SPOP
0.683
More...
Q8N103
T-cell activation Rho GTPase-activating protein
DEG_SPOP_SBC_1
459:463
AFSSS
SPOP
0.9042
More...
Q8N7K0
Zinc finger protein 433
DEG_SPOP_SBC_1
290:294
AFSSS
SPOP
0.5748
More...
A8MVW0
Protein FAM171A2
DEG_SPOP_SBC_1
401:405
AFSSS
SPOP
0.9201
More...
Q9BXQ6
Transmembrane protein 121B
DEG_SPOP_SBC_1
112:116
AFSSS
SPOP
0.7062
More...