DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
AFSSS
Uniprot ID:
Q9H4D5
Source protein:
Nuclear RNA export factor 3
Source gene:
NXF3
Class:
DEG_SPOP_SBC_1
Location:
513:517
E3 ligase:
SPOP
DEGRON score:
0.6018
ASA_SCORE:
85.6
COIL:
0.9384
CONS_SCORE:
0.318
DSS_SCORE:
0.2284
HELIX:
0.0182
FCONS_SCORE:
0.9104
RIG_SCORE:
0.7365
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S515P
TCGA-77-A5G1
LUSC
TCGA
AFSSS
DEG_SPOP_SBC_1
0.6752
p.L509I
TCGA-86-8585
LUAD
TCGA
AFSSS
DEG_SPOP_SBC_1
0.2222
p.V518M
TCGA-A6-A567
COAD
TCGA
AFSSS
DEG_SPOP_SBC_1
0.3056
p.S504N
TCGA-CN-5356
HNSC
TCGA
AFSSS
DEG_SPOP_SBC_1
0.0833
p.S522F
ACH-001552
Skin Cancer
CCLE
AFSSS
DEG_SPOP_SBC_1
0.1944
Drug responses associated with NXF3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AFSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75132
Zinc finger BED domain-containing protein 4
DEG_SPOP_SBC_1
413:417
AFSSS
SPOP
0.5892
More...
O75410
Transforming acidic coiled-coil-containing protein 1
DEG_SPOP_SBC_1
547:551
AFSSS
SPOP
0.8702
More...
O94823
Phospholipid-transporting ATPase VB
DEG_SPOP_SBC_1
535:539
AFSSS
SPOP
0.6502
More...
P08235
Mineralocorticoid receptor
DEG_SPOP_SBC_1
405:409
AFSSS
SPOP
0.9658
More...
Q14584
Zinc finger protein 266
DEG_SPOP_SBC_1
528:532
AFSSS
SPOP
0.6008
More...
Q8WUY3
Protein prune homolog 2
DEG_SPOP_SBC_1
842:846
AFSSS
SPOP
0.9053
More...
Q9H4D5
Nuclear RNA export factor 3
DEG_SPOP_SBC_1
513:517
AFSSS
SPOP
0.6018
More...
Q9HBZ2
Aryl hydrocarbon receptor nuclear translocator 2
DEG_SPOP_SBC_1
536:540
AFSSS
SPOP
0.9671
More...
Q9Y2K5
R3H domain-containing protein 2
DEG_SPOP_SBC_1
286:290
AFSSS
SPOP
0.8107
More...
Q8IZF4
Adhesion G-protein coupled receptor G5
DEG_SPOP_SBC_1
520:524
AFSSS
SPOP
0.683
More...
Q8N103
T-cell activation Rho GTPase-activating protein
DEG_SPOP_SBC_1
459:463
AFSSS
SPOP
0.9042
More...
Q8N7K0
Zinc finger protein 433
DEG_SPOP_SBC_1
290:294
AFSSS
SPOP
0.5748
More...
A8MVW0
Protein FAM171A2
DEG_SPOP_SBC_1
401:405
AFSSS
SPOP
0.9201
More...
Q9BXQ6
Transmembrane protein 121B
DEG_SPOP_SBC_1
112:116
AFSSS
SPOP
0.7062
More...