DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
AHSSS
Uniprot ID:
Q05952
Source protein:
Nuclear transition protein 2
Source gene:
TNP2
Class:
DEG_SPOP_SBC_1
Location:
62:66
E3 ligase:
SPOP
DEGRON score:
0.9869
ASA_SCORE:
85.44
COIL:
0.9224
CONS_SCORE:
0.8916
DSS_SCORE:
0.925
HELIX:
0.0344
FCONS_SCORE:
1.3047
RIG_SCORE:
0.4081
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R57C
TCGA-A5-A0G1
UCEC
TCGA
AHSSS
DEG_SPOP_SBC_1
0.1944
p.R57C
DO42472
UCEC
ICGC
AHSSS
DEG_SPOP_SBC_1
0.1944
p.P53L
TCGA-AX-A1C5
UCEC
TCGA
AHSSS
DEG_SPOP_SBC_1
0.0833
p.P53L
DO227752
COCA
ICGC
AHSSS
DEG_SPOP_SBC_1
0.0833
p.P53L
DO41422
UCEC
ICGC
AHSSS
DEG_SPOP_SBC_1
0.0833
p.N58I
TCGA-CD-5801
STAD
TCGA
AHSSS
DEG_SPOP_SBC_1
0.2222
p.N58I
DO38563
STAD
ICGC
AHSSS
DEG_SPOP_SBC_1
0.2222
p.S65L
TCGA-EE-A2MM
SKCM
TCGA
AHSSS
DEG_SPOP_SBC_1
0.7667
p.S65L
DO222678
MELA
ICGC
AHSSS
DEG_SPOP_SBC_1
0.7667
p.S65L
DO229459
SKCA
ICGC
AHSSS
DEG_SPOP_SBC_1
0.7667
p.S65L
DO37770
SKCM
ICGC
AHSSS
DEG_SPOP_SBC_1
0.7667
p.T60A
TCGA-QG-A5Z1
COAD
TCGA
AHSSS
DEG_SPOP_SBC_1
0.2778
p.T60A
DO51731
COAD
ICGC
AHSSS
DEG_SPOP_SBC_1
0.2778
p.T60A
SIDM01878
Non-Cancerous
GDSC
AHSSS
DEG_SPOP_SBC_1
0.2778
p.T60A
SIDM00053
Pancreatic Carcinoma
GDSC
AHSSS
DEG_SPOP_SBC_1
0.2778
p.T60A
ACH-002360
Non-Cancerous
CCLE
AHSSS
DEG_SPOP_SBC_1
0.2778
p.P73T
DO223457
CLLE
ICGC
AHSSS
DEG_SPOP_SBC_1
0.1389
p.S55R
DO228971
LICA
ICGC
AHSSS
DEG_SPOP_SBC_1
0.1389
p.A54D
DO229029
LICA
ICGC
AHSSS
DEG_SPOP_SBC_1
0.1111
p.H68N
DO229026
LICA
ICGC
AHSSS
DEG_SPOP_SBC_1
0.2778
p.S64R
DO229041
LICA
ICGC
AHSSS
DEG_SPOP_SBC_1
0.7427
p.R57H
SIDM00447
B-Lymphoblastic Leukemia
GDSC
AHSSS
DEG_SPOP_SBC_1
0.1944
p.R57H
ACH-000960
Leukemia
CCLE
AHSSS
DEG_SPOP_SBC_1
0.1944
p.R57H
REH
haematopoietic_and_lymphoid_tissue
COSMIC
AHSSS
DEG_SPOP_SBC_1
0.1944
p.G67S
SIDM01763
Rhabdomyosarcoma
GDSC
AHSSS
DEG_SPOP_SBC_1
0.3056
p.G67S
ACH-000079
Non-Cancerous
CCLE
AHSSS
DEG_SPOP_SBC_1
0.3056
Drug responses associated with TNP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AHSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15015
Zinc finger protein 646
DEG_SPOP_SBC_1
903:907
AHSSS
SPOP
0.9691
More...
O60269
G protein-regulated inducer of neurite outgrowth 2
DEG_SPOP_SBC_1
206:210
AHSSS
SPOP
0.855
More...
O95425
Supervillin
DEG_SPOP_SBC_1
249:253
AHSSS
SPOP
0.9277
More...
P51825
AF4/FMR2 family member 1
DEG_SPOP_SBC_1
464:468
AHSSS
SPOP
0.8527
More...
Q13416
Origin recognition complex subunit 2
DEG_SPOP_SBC_1
246:250
AHSSS
SPOP
0.8711
More...
Q13586
Stromal interaction molecule 1
DEG_SPOP_SBC_1
397:401
AHSSS
SPOP
0.9518
More...
Q6UVJ0
Spindle assembly abnormal protein 6 homolog
DEG_SPOP_SBC_1
498:502
AHSSS
SPOP
0.9472
More...
Q05952
Nuclear transition protein 2
DEG_SPOP_SBC_1
62:66
AHSSS
SPOP
0.9869
More...
Q8IX06
Putative exonuclease GOR
DEG_SPOP_SBC_1
211:215
AHSSS
SPOP
0.5387
More...
Q8WYN3
Cysteine/serine-rich nuclear protein 3
DEG_SPOP_SBC_1
297:301
AHSSS
SPOP
0.8601
More...
Q9ULI4
Kinesin-like protein KIF26A
DEG_SPOP_SBC_1
1445:1449
AHSSS
SPOP
0.9988
More...
A6NMT0
Homeobox protein DBX1
DEG_SPOP_SBC_1
314:318
AHSSS
SPOP
0.9343
More...
C9J798
Ras GTPase-activating protein 4B
DEG_SPOP_SBC_1
782:786
AHSSS
SPOP
0.6288
More...
Q2WGJ9
Fer-1-like protein 6
DEG_SPOP_SBC_1
1123:1127
AHSSS
SPOP
0.7335
More...
A6NNC1
Putative POM121-like protein 1-like
DEG_SPOP_SBC_1
422:426
AHSSS
SPOP
0.9446
More...
A6NNC1
Putative POM121-like protein 1-like
DEG_SPOP_SBC_1
694:698
AHSSS
SPOP
0.9817
More...
P0C879
Putative uncharacterized protein FLJ43185
DEG_SPOP_SBC_1
76:80
AHSSS
SPOP
0.9484
More...