DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PCSSS
Uniprot ID:
Q8TC76
Source protein:
Protein FAM110B
Source gene:
FAM110B
Class:
DEG_SPOP_SBC_1
Location:
216:220
E3 ligase:
SPOP
DEGRON score:
0.9592
ASA_SCORE:
82.92
COIL:
0.9386
CONS_SCORE:
0.6493
DSS_SCORE:
0.5012
HELIX:
0.0272
FCONS_SCORE:
1.2167
RIG_SCORE:
0.6507
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V209L
TCGA-21-1070
LUSC
TCGA
PCSSS
DEG_SPOP_SBC_1
0.1389
p.V209L
DO27088
LUSC
ICGC
PCSSS
DEG_SPOP_SBC_1
0.1389
p.P222H
TCGA-39-5016
LUSC
TCGA
PCSSS
DEG_SPOP_SBC_1
0.2778
p.P222H
DO26701
LUSC
ICGC
PCSSS
DEG_SPOP_SBC_1
0.2778
p.S220P
TCGA-A5-A1OF
UCEC
TCGA
PCSSS
DEG_SPOP_SBC_1
0.6752
p.S220P
DO42568
UCEC
ICGC
PCSSS
DEG_SPOP_SBC_1
0.6752
p.P211H
TCGA-AP-A054
UCEC
TCGA
PCSSS
DEG_SPOP_SBC_1
0.1944
p.P211H
DO42256
UCEC
ICGC
PCSSS
DEG_SPOP_SBC_1
0.1944
p.S208R
TCGA-AX-A1C5
UCEC
TCGA
PCSSS
DEG_SPOP_SBC_1
0.1111
p.S208R
DO41422
UCEC
ICGC
PCSSS
DEG_SPOP_SBC_1
0.1111
p.V206A
TCGA-CV-7247
HNSC
TCGA
PCSSS
DEG_SPOP_SBC_1
0.0556
p.V206A
DO14982
HNSC
ICGC
PCSSS
DEG_SPOP_SBC_1
0.0556
p.S220C
TCGA-NJ-A4YG
LUAD
TCGA
PCSSS
DEG_SPOP_SBC_1
0.7541
p.S220C
DO218941
LUAD
ICGC
PCSSS
DEG_SPOP_SBC_1
0.7541
p.L212F
DO230335
COCA
ICGC
PCSSS
DEG_SPOP_SBC_1
0.2222
p.P228S
DO220862
MELA
ICGC
PCSSS
DEG_SPOP_SBC_1
0.1111
p.V209M
SIDM00280
Gastric Carcinoma
GDSC
PCSSS
DEG_SPOP_SBC_1
0.1389
p.V209M
ACH-000560
Gastric Cancer
CCLE
PCSSS
DEG_SPOP_SBC_1
0.1389
p.V209M
ECC10
stomach
COSMIC
PCSSS
DEG_SPOP_SBC_1
0.1389
Drug responses associated with FAM110B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PCSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75385
Serine/threonine-protein kinase ULK1
DEG_SPOP_SBC_1
407:411
PCSSS
SPOP
0.9876
More...
Q03167
Transforming growth factor beta receptor type 3
DEG_SPOP_SBC_1
844:848
PCSSS
SPOP
0.998
More...
Q5T749
Keratinocyte proline-rich protein
DEG_SPOP_SBC_1
277:281
PCSSS
SPOP
0.9032
More...
Q6W2J9
BCL-6 corepressor
DEG_SPOP_SBC_1
1435:1439
PCSSS
SPOP
0.935
More...
Q8IYX3
Coiled-coil domain-containing protein 116
DEG_SPOP_SBC_1
403:407
PCSSS
SPOP
0.772
More...
Q8NBR6
Ubiquitin carboxyl-terminal hydrolase MINDY-2
DEG_SPOP_SBC_1
78:82
PCSSS
SPOP
0.992
More...
Q8WZ75
Roundabout homolog 4
DEG_SPOP_SBC_1
617:621
PCSSS
SPOP
0.8344
More...
Q99941
Cyclic AMP-dependent transcription factor ATF-6 beta
DEG_SPOP_SBC_1
94:98
PCSSS
SPOP
0.9963
More...
Q9NWZ8
Gem-associated protein 8
DEG_SPOP_SBC_1
87:91
PCSSS
SPOP
0.9101
More...
Q8TC76
Protein FAM110B
DEG_SPOP_SBC_1
216:220
PCSSS
SPOP
0.9592
More...
Q9BU23
Lipase maturation factor 2
DEG_SPOP_SBC_1
695:699
PCSSS
SPOP
0.9238
More...
Q9Y5P3
Retinoic acid-induced protein 2
DEG_SPOP_SBC_1
145:149
PCSSS
SPOP
0.7764
More...
Q7Z736
Pleckstrin homology domain-containing family H member 3
DEG_SPOP_SBC_1
755:759
PCSSS
SPOP
0.8988
More...