DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PCSSS
Uniprot ID:
Q9NWZ8
Source protein:
Gem-associated protein 8
Source gene:
GEMIN8
Class:
DEG_SPOP_SBC_1
Location:
87:91
E3 ligase:
SPOP
DEGRON score:
0.9101
ASA_SCORE:
62.64
COIL:
0.855
CONS_SCORE:
0.3471
DSS_SCORE:
0.3647
HELIX:
0.1142
FCONS_SCORE:
0.9708
RIG_SCORE:
0.6958
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q98K
TCGA-17-Z037
LUAD
TCGA
PCSSS
DEG_SPOP_SBC_1
0.1389
p.H80Y
TCGA-17-Z057
LUAD
TCGA
PCSSS
DEG_SPOP_SBC_1
0.1389
p.W83L
TCGA-AK-3440
KIRC
TCGA
PCSSS
DEG_SPOP_SBC_1
0.2222
p.Y86C
TCGA-DI-A1BU
UCEC
TCGA
PCSSS
DEG_SPOP_SBC_1
0.3056
p.Y86C
DO42023
UCEC
ICGC
PCSSS
DEG_SPOP_SBC_1
0.3056
p.S96Y
TCGA-EY-A215
UCEC
TCGA
PCSSS
DEG_SPOP_SBC_1
0.1944
p.S96Y
DO42665
UCEC
ICGC
PCSSS
DEG_SPOP_SBC_1
0.1944
p.H79N
DO229028
LICA
ICGC
PCSSS
DEG_SPOP_SBC_1
0.1111
p.R95I
SIDM01090
Colorectal Carcinoma
GDSC
PCSSS
DEG_SPOP_SBC_1
0.2222
p.R95I
ACH-000943
Colon/Colorectal Cancer
CCLE
PCSSS
DEG_SPOP_SBC_1
0.2222
p.R95I
RKO
large_intestine
COSMIC
PCSSS
DEG_SPOP_SBC_1
0.2222
p.G97E
SIDM00150
Colorectal Carcinoma
GDSC
PCSSS
DEG_SPOP_SBC_1
0.1667
p.G97E
ACH-000969
Colon/Colorectal Cancer
CCLE
PCSSS
DEG_SPOP_SBC_1
0.1667
p.G97E
KM12
large_intestine
COSMIC
PCSSS
DEG_SPOP_SBC_1
0.1667
Drug responses associated with GEMIN8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PCSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75385
Serine/threonine-protein kinase ULK1
DEG_SPOP_SBC_1
407:411
PCSSS
SPOP
0.9876
More...
Q03167
Transforming growth factor beta receptor type 3
DEG_SPOP_SBC_1
844:848
PCSSS
SPOP
0.998
More...
Q5T749
Keratinocyte proline-rich protein
DEG_SPOP_SBC_1
277:281
PCSSS
SPOP
0.9032
More...
Q6W2J9
BCL-6 corepressor
DEG_SPOP_SBC_1
1435:1439
PCSSS
SPOP
0.935
More...
Q8IYX3
Coiled-coil domain-containing protein 116
DEG_SPOP_SBC_1
403:407
PCSSS
SPOP
0.772
More...
Q8NBR6
Ubiquitin carboxyl-terminal hydrolase MINDY-2
DEG_SPOP_SBC_1
78:82
PCSSS
SPOP
0.992
More...
Q8WZ75
Roundabout homolog 4
DEG_SPOP_SBC_1
617:621
PCSSS
SPOP
0.8344
More...
Q99941
Cyclic AMP-dependent transcription factor ATF-6 beta
DEG_SPOP_SBC_1
94:98
PCSSS
SPOP
0.9963
More...
Q9NWZ8
Gem-associated protein 8
DEG_SPOP_SBC_1
87:91
PCSSS
SPOP
0.9101
More...
Q8TC76
Protein FAM110B
DEG_SPOP_SBC_1
216:220
PCSSS
SPOP
0.9592
More...
Q9BU23
Lipase maturation factor 2
DEG_SPOP_SBC_1
695:699
PCSSS
SPOP
0.9238
More...
Q9Y5P3
Retinoic acid-induced protein 2
DEG_SPOP_SBC_1
145:149
PCSSS
SPOP
0.7764
More...
Q7Z736
Pleckstrin homology domain-containing family H member 3
DEG_SPOP_SBC_1
755:759
PCSSS
SPOP
0.8988
More...