DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PESST
Uniprot ID:
P54725
Source protein:
UV excision repair protein RAD23 homolog A
Source gene:
RAD23A
Class:
DEG_SPOP_SBC_1
Location:
97:101
E3 ligase:
SPOP
DEGRON score:
0.9802
ASA_SCORE:
90.24
COIL:
0.9104
CONS_SCORE:
0.3185
DSS_SCORE:
0.7508
HELIX:
0.0518
FCONS_SCORE:
1.0261
RIG_SCORE:
0.5298
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P107H
TCGA-D3-A1QA
SKCM
TCGA
PESST
DEG_SPOP_SBC_1
0.1667
p.P107H
DO47469
SKCM
ICGC
PESST
DEG_SPOP_SBC_1
0.1667
p.P104L
DO233869
GACA
ICGC
PESST
DEG_SPOP_SBC_1
0.25
p.P104L
SIDM01154
T-Lymphoblastic Leukemia
GDSC
PESST
DEG_SPOP_SBC_1
0.25
p.P104L
SUP-T1
haematopoietic_and_lymphoid_tissue
COSMIC
PESST
DEG_SPOP_SBC_1
0.25
p.A95D
DO50727
ORCA
ICGC
PESST
DEG_SPOP_SBC_1
0.2778
p.S100A
SIDM00585
Hepatocellular Carcinoma
GDSC
PESST
DEG_SPOP_SBC_1
0.7588
p.S100A
SIDM01433
Kidney Carcinoma
GDSC
PESST
DEG_SPOP_SBC_1
0.7588
p.S100A
ACH-000317
Kidney Cancer
CCLE
PESST
DEG_SPOP_SBC_1
0.7588
p.S100A
ACH-000480
Liver Cancer
CCLE
PESST
DEG_SPOP_SBC_1
0.7588
p.S100A
HuH-7
liver
COSMIC
PESST
DEG_SPOP_SBC_1
0.7588
Drug responses associated with RAD23A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PESST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94986
Centrosomal protein of 152 kDa
DEG_SPOP_SBC_1
609:613
PESST
SPOP
0.7195
More...
P54725
UV excision repair protein RAD23 homolog A
DEG_SPOP_SBC_1
97:101
PESST
SPOP
0.9802
More...
Q12967
Ral guanine nucleotide dissociation stimulator
DEG_SPOP_SBC_1
60:64
PESST
SPOP
0.7712
More...
Q49A26
Putative oxidoreductase GLYR1
DEG_SPOP_SBC_1
184:188
PESST
SPOP
0.9378
More...
Q5QJE6
Deoxynucleotidyltransferase terminal-interacting protein 2
DEG_SPOP_SBC_1
35:39
PESST
SPOP
0.7551
More...
Q5QP82
DDB1- and CUL4-associated factor 10
DEG_SPOP_SBC_1
77:81
PESST
SPOP
0.8874
More...
Q86UK5
Limbin
DEG_SPOP_SBC_1
71:75
PESST
SPOP
0.9462
More...
Q8IWN7
Retinitis pigmentosa 1-like 1 protein
DEG_SPOP_SBC_1
2345:2349
PESST
SPOP
0.9601
More...
Q8NA72
Centrosomal protein POC5
DEG_SPOP_SBC_1
545:549
PESST
SPOP
0.993
More...
Q9HAU0
Pleckstrin homology domain-containing family A member 5
DEG_SPOP_SBC_1
858:862
PESST
SPOP
0.9895
More...
Q9P206
Uncharacterized protein KIAA1522
DEG_SPOP_SBC_1
383:387
PESST
SPOP
0.9636
More...