DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PESST
Uniprot ID:
Q49A26
Source protein:
Putative oxidoreductase GLYR1
Source gene:
GLYR1
Class:
DEG_SPOP_SBC_1
Location:
184:188
E3 ligase:
SPOP
DEGRON score:
0.9378
ASA_SCORE:
82.32
COIL:
0.7934
CONS_SCORE:
0.118
DSS_SCORE:
0.6523
HELIX:
0.1738
FCONS_SCORE:
1.0143
RIG_SCORE:
0.6943
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G195R
TCGA-EE-A29N
SKCM
TCGA
PESST
DEG_SPOP_SBC_1
0.1389
p.G195R
DO229063
LICA
ICGC
PESST
DEG_SPOP_SBC_1
0.1389
p.G195R
DO38001
SKCM
ICGC
PESST
DEG_SPOP_SBC_1
0.1389
p.P174L
TCGA-FW-A3R5
SKCM
TCGA
PESST
DEG_SPOP_SBC_1
0.0556
p.P174L
DO37406
SKCM
ICGC
PESST
DEG_SPOP_SBC_1
0.0556
p.D180H
TCGA-G6-A8L8
KIRC
TCGA
PESST
DEG_SPOP_SBC_1
0.2222
p.E178K
TCGA-P3-A6T3
HNSC
TCGA
PESST
DEG_SPOP_SBC_1
0.1667
p.E178K
DO49055
HNSC
ICGC
PESST
DEG_SPOP_SBC_1
0.1667
p.P184L
TCGA-XK-AAIW
PRAD
TCGA
PESST
DEG_SPOP_SBC_1
0.7582
p.P184L
DO51407
PRAD
ICGC
PESST
DEG_SPOP_SBC_1
0.7582
p.A194T
DO227657
COCA
ICGC
PESST
DEG_SPOP_SBC_1
0.1667
p.T182I
DO222875
MELA
ICGC
PESST
DEG_SPOP_SBC_1
0.2778
p.A194V
SIDM00216
Colorectal Carcinoma
GDSC
PESST
DEG_SPOP_SBC_1
0.1667
p.A194V
ACH-000989
Colon/Colorectal Cancer
CCLE
PESST
DEG_SPOP_SBC_1
0.1667
p.A194V
SNU-175
large_intestine
COSMIC
PESST
DEG_SPOP_SBC_1
0.1667
p.A198T
SIDM00151
Ovarian Carcinoma
GDSC
PESST
DEG_SPOP_SBC_1
0.0556
p.A198T
ACH-000966
Ovarian Cancer
CCLE
PESST
DEG_SPOP_SBC_1
0.0556
p.A198T
IGROV-1
ovary
COSMIC
PESST
DEG_SPOP_SBC_1
0.0556
p.P196S
SIDM00177
Melanoma
GDSC
PESST
DEG_SPOP_SBC_1
0.1111
p.P196S
ACH-002338
Skin Cancer
CCLE
PESST
DEG_SPOP_SBC_1
0.1111
p.P196S
ACH-002510
Skin Cancer
CCLE
PESST
DEG_SPOP_SBC_1
0.1111
p.P196L
SIDM00431
T-Lymphoblastic Leukemia
GDSC
PESST
DEG_SPOP_SBC_1
0.1111
p.P196L
ACH-000918
Leukemia
CCLE
PESST
DEG_SPOP_SBC_1
0.1111
p.P196L
MOLT-16
haematopoietic_and_lymphoid_tissue
COSMIC
PESST
DEG_SPOP_SBC_1
0.1111
p.F191L
SNU-81
large_intestine
COSMIC
PESST
DEG_SPOP_SBC_1
0.25
p.M197V
Detroit562
upper_aerodigestive_tract
COSMIC
PESST
DEG_SPOP_SBC_1
0.0833
p.D186G
PF-382
haematopoietic_and_lymphoid_tissue
COSMIC
PESST
DEG_SPOP_SBC_1
0.7198
Drug responses associated with GLYR1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PESST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94986
Centrosomal protein of 152 kDa
DEG_SPOP_SBC_1
609:613
PESST
SPOP
0.7195
More...
P54725
UV excision repair protein RAD23 homolog A
DEG_SPOP_SBC_1
97:101
PESST
SPOP
0.9802
More...
Q12967
Ral guanine nucleotide dissociation stimulator
DEG_SPOP_SBC_1
60:64
PESST
SPOP
0.7712
More...
Q49A26
Putative oxidoreductase GLYR1
DEG_SPOP_SBC_1
184:188
PESST
SPOP
0.9378
More...
Q5QJE6
Deoxynucleotidyltransferase terminal-interacting protein 2
DEG_SPOP_SBC_1
35:39
PESST
SPOP
0.7551
More...
Q5QP82
DDB1- and CUL4-associated factor 10
DEG_SPOP_SBC_1
77:81
PESST
SPOP
0.8874
More...
Q86UK5
Limbin
DEG_SPOP_SBC_1
71:75
PESST
SPOP
0.9462
More...
Q8IWN7
Retinitis pigmentosa 1-like 1 protein
DEG_SPOP_SBC_1
2345:2349
PESST
SPOP
0.9601
More...
Q8NA72
Centrosomal protein POC5
DEG_SPOP_SBC_1
545:549
PESST
SPOP
0.993
More...
Q9HAU0
Pleckstrin homology domain-containing family A member 5
DEG_SPOP_SBC_1
858:862
PESST
SPOP
0.9895
More...
Q9P206
Uncharacterized protein KIAA1522
DEG_SPOP_SBC_1
383:387
PESST
SPOP
0.9636
More...