DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PKSTS
Uniprot ID:
O75132
Source protein:
Zinc finger BED domain-containing protein 4
Source gene:
ZBED4
Class:
DEG_SPOP_SBC_1
Location:
278:282
E3 ligase:
SPOP
DEGRON score:
0.8251
ASA_SCORE:
101.48
COIL:
0.9308
CONS_SCORE:
0.4043
DSS_SCORE:
0.4917
HELIX:
0.0402
FCONS_SCORE:
1.1162
RIG_SCORE:
0.6318
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G283R
TCGA-18-3409
LUSC
TCGA
PKSTS
DEG_SPOP_SBC_1
0.3056
p.G283R
DO26444
LUSC
ICGC
PKSTS
DEG_SPOP_SBC_1
0.3056
p.K273N
TCGA-85-6561
LUSC
TCGA
PKSTS
DEG_SPOP_SBC_1
0.6389
p.K273N
DO26518
LUSC
ICGC
PKSTS
DEG_SPOP_SBC_1
0.6389
p.K273E
TCGA-UY-A8OB
BLCA
TCGA
PKSTS
DEG_SPOP_SBC_1
0.6389
p.K273E
DO219037
BLCA
ICGC
PKSTS
DEG_SPOP_SBC_1
0.6389
p.R286K
DO218874
SKCA
ICGC
PKSTS
DEG_SPOP_SBC_1
0.2222
p.R287K
SIDM00734
Non-Small Cell Lung Carcinoma
GDSC
PKSTS
DEG_SPOP_SBC_1
0.1944
p.R287K
SIDM01680
Non-Cancerous
GDSC
PKSTS
DEG_SPOP_SBC_1
0.1944
p.R287K
ACH-000589
Lung Cancer
CCLE
PKSTS
DEG_SPOP_SBC_1
0.1944
p.R287K
ACH-002364
Non-Cancerous
CCLE
PKSTS
DEG_SPOP_SBC_1
0.1944
p.K292Q
ACH-000127
Bladder Cancer
CCLE
PKSTS
DEG_SPOP_SBC_1
0.1667
Drug responses associated with ZBED4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PKSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14939
Phospholipase D2
DEG_SPOP_SBC_1
583:587
PKSTS
SPOP
0.7698
More...
O43497
Voltage-dependent T-type calcium channel subunit alpha-1G
DEG_SPOP_SBC_1
1051:1055
PKSTS
SPOP
0.9183
More...
O75132
Zinc finger BED domain-containing protein 4
DEG_SPOP_SBC_1
278:282
PKSTS
SPOP
0.8251
More...
P27816
Microtubule-associated protein 4
DEG_SPOP_SBC_1
861:865
PKSTS
SPOP
0.994
More...
Q08495
Dematin
DEG_SPOP_SBC_1
88:92
PKSTS
SPOP
0.8879
More...
Q14154
DAP3-binding cell death enhancer 1
DEG_SPOP_SBC_1
25:29
PKSTS
SPOP
0.9768
More...
Q5JR59
Microtubule-associated tumor suppressor candidate 2
DEG_SPOP_SBC_1
928:932
PKSTS
SPOP
0.974
More...
Q5T011
KICSTOR complex protein SZT2
DEG_SPOP_SBC_1
2971:2975
PKSTS
SPOP
0.5397
More...
Q8NDX5
Polyhomeotic-like protein 3
DEG_SPOP_SBC_1
234:238
PKSTS
SPOP
0.6925
More...
Q9H808
Transducin-like enhancer protein 6
DEG_SPOP_SBC_1
13:17
PKSTS
SPOP
0.6634
More...
Q9NW75
G patch domain-containing protein 2
DEG_SPOP_SBC_1
513:517
PKSTS
SPOP
0.8361
More...