DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PKSTS
Uniprot ID:
Q9NW75
Source protein:
G patch domain-containing protein 2
Source gene:
GPATCH2
Class:
DEG_SPOP_SBC_1
Location:
513:517
E3 ligase:
SPOP
DEGRON score:
0.8361
ASA_SCORE:
94.56
COIL:
0.9036
CONS_SCORE:
0.3758
DSS_SCORE:
0.6216
HELIX:
0.0374
FCONS_SCORE:
0.831
RIG_SCORE:
0.648
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G505A
TCGA-85-8071
LUSC
TCGA
PKSTS
DEG_SPOP_SBC_1
0.1111
p.G505A
DO26755
LUSC
ICGC
PKSTS
DEG_SPOP_SBC_1
0.1111
p.P522L
TCGA-F4-6807
COAD
TCGA
PKSTS
DEG_SPOP_SBC_1
0.1944
p.P522L
DO9716
COAD
ICGC
PKSTS
DEG_SPOP_SBC_1
0.1944
p.K514I
DO48386
BLCA
ICGC
PKSTS
DEG_SPOP_SBC_1
0.642
p.F510Y
DO231958
LICA
ICGC
PKSTS
DEG_SPOP_SBC_1
0.25
p.T516N
DO229028
LICA
ICGC
PKSTS
DEG_SPOP_SBC_1
0.8166
p.P513T
DO229006
LICA
ICGC
PKSTS
DEG_SPOP_SBC_1
0.7031
p.A518S
SIDM00435
Acute Myeloid Leukemia
GDSC
PKSTS
DEG_SPOP_SBC_1
0.3056
p.A518S
ACH-000369
Leukemia
CCLE
PKSTS
DEG_SPOP_SBC_1
0.3056
p.A518S
MOLM-16
haematopoietic_and_lymphoid_tissue
COSMIC
PKSTS
DEG_SPOP_SBC_1
0.3056
p.S527T
SIDM01090
Colorectal Carcinoma
GDSC
PKSTS
DEG_SPOP_SBC_1
0.0556
p.S527T
ACH-000943
Colon/Colorectal Cancer
CCLE
PKSTS
DEG_SPOP_SBC_1
0.0556
p.S527T
RKO
large_intestine
COSMIC
PKSTS
DEG_SPOP_SBC_1
0.0556
Drug responses associated with GPATCH2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PKSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14939
Phospholipase D2
DEG_SPOP_SBC_1
583:587
PKSTS
SPOP
0.7698
More...
O43497
Voltage-dependent T-type calcium channel subunit alpha-1G
DEG_SPOP_SBC_1
1051:1055
PKSTS
SPOP
0.9183
More...
O75132
Zinc finger BED domain-containing protein 4
DEG_SPOP_SBC_1
278:282
PKSTS
SPOP
0.8251
More...
P27816
Microtubule-associated protein 4
DEG_SPOP_SBC_1
861:865
PKSTS
SPOP
0.994
More...
Q08495
Dematin
DEG_SPOP_SBC_1
88:92
PKSTS
SPOP
0.8879
More...
Q14154
DAP3-binding cell death enhancer 1
DEG_SPOP_SBC_1
25:29
PKSTS
SPOP
0.9768
More...
Q5JR59
Microtubule-associated tumor suppressor candidate 2
DEG_SPOP_SBC_1
928:932
PKSTS
SPOP
0.974
More...
Q5T011
KICSTOR complex protein SZT2
DEG_SPOP_SBC_1
2971:2975
PKSTS
SPOP
0.5397
More...
Q8NDX5
Polyhomeotic-like protein 3
DEG_SPOP_SBC_1
234:238
PKSTS
SPOP
0.6925
More...
Q9H808
Transducin-like enhancer protein 6
DEG_SPOP_SBC_1
13:17
PKSTS
SPOP
0.6634
More...
Q9NW75
G patch domain-containing protein 2
DEG_SPOP_SBC_1
513:517
PKSTS
SPOP
0.8361
More...