DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PMSSS
Uniprot ID:
P01266
Source protein:
Thyroglobulin
Source gene:
TG
Class:
DEG_SPOP_SBC_1
Location:
2443:2447
E3 ligase:
SPOP
DEGRON score:
0.5138
ASA_SCORE:
68.12
COIL:
0.8504
CONS_SCORE:
0.3646
DSS_SCORE:
0.1945
HELIX:
0.1396
FCONS_SCORE:
0.7329
RIG_SCORE:
0.6773
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S2446Y
TCGA-60-2706
LUSC
TCGA
PMSSS
DEG_SPOP_SBC_1
0.712
p.C2442F
TCGA-AA-A01S
COAD
TCGA
PMSSS
DEG_SPOP_SBC_1
0.3056
p.M2444T
TCGA-CV-7245
HNSC
TCGA
PMSSS
DEG_SPOP_SBC_1
0.6312
p.R2455C
TCGA-FR-A3YO
SKCM
TCGA
PMSSS
DEG_SPOP_SBC_1
0.1111
p.R2455C
SIDM00011
Melanoma
GDSC
PMSSS
DEG_SPOP_SBC_1
0.1111
p.M2444I
SIDM00282
Colorectal Carcinoma
GDSC
PMSSS
DEG_SPOP_SBC_1
0.6507
p.M2444I
SIDM00145
T-Lymphoblastic Leukemia
GDSC
PMSSS
DEG_SPOP_SBC_1
0.6507
p.M2444I
ACH-000998
Colon/Colorectal Cancer
CCLE
PMSSS
DEG_SPOP_SBC_1
0.6507
p.M2444I
ACH-001127
Leukemia
CCLE
PMSSS
DEG_SPOP_SBC_1
0.6507
p.M2444I
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
PMSSS
DEG_SPOP_SBC_1
0.6507
p.M2444I
CW-2
large_intestine
COSMIC
PMSSS
DEG_SPOP_SBC_1
0.6507
p.R2455H
SIDM00574
Glioblastoma
GDSC
PMSSS
DEG_SPOP_SBC_1
0.1111
p.R2455H
SIDM00579
Neuroblastoma
GDSC
PMSSS
DEG_SPOP_SBC_1
0.1111
p.R2455H
SIDM01782
Oral Cavity Carcinoma
GDSC
PMSSS
DEG_SPOP_SBC_1
0.1111
p.V2440I
SIDM00283
B-Cell Non-Hodgkin's Lymphoma
GDSC
PMSSS
DEG_SPOP_SBC_1
0.25
p.V2440I
CTB-1
haematopoietic_and_lymphoid_tissue
COSMIC
PMSSS
DEG_SPOP_SBC_1
0.25
p.K2457R
SIDM00554
Ovarian Carcinoma
GDSC
PMSSS
DEG_SPOP_SBC_1
0.1667
p.K2457R
KURAMOCHI
ovary
COSMIC
PMSSS
DEG_SPOP_SBC_1
0.1667
p.S2447R
SIDM00975
Melanoma
GDSC
PMSSS
DEG_SPOP_SBC_1
0.7427
p.S2447R
ACH-002206
Skin Cancer
CCLE
PMSSS
DEG_SPOP_SBC_1
0.7427
p.S2447R
WM278
skin
COSMIC
PMSSS
DEG_SPOP_SBC_1
0.7427
p.S2446F
SIDM01782
Oral Cavity Carcinoma
GDSC
PMSSS
DEG_SPOP_SBC_1
0.7982
Drug responses associated with TG mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PMSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15062
Zinc finger and BTB domain-containing protein 5
DEG_SPOP_SBC_1
170:174
PMSSS
SPOP
0.8158
More...
P01266
Thyroglobulin
DEG_SPOP_SBC_1
2443:2447
PMSSS
SPOP
0.5138
More...
P39880
Homeobox protein cut-like 1
DEG_SPOP_SBC_1
1060:1064
PMSSS
SPOP
0.9994
More...
Q2KHR2
DNA-binding protein RFX7
DEG_SPOP_SBC_1
285:289
PMSSS
SPOP
0.9583
More...
Q6AWC2
Protein WWC2
DEG_SPOP_SBC_1
569:573
PMSSS
SPOP
0.827
More...
Q6PCT2
F-box/LRR-repeat protein 19
DEG_SPOP_SBC_1
20:24
PMSSS
SPOP
0.8896
More...
Q96JG9
Zinc finger protein 469
DEG_SPOP_SBC_1
610:614
PMSSS
SPOP
0.8719
More...
Q9H0N0
Ras-related protein Rab-6C
DEG_SPOP_SBC_1
211:215
PMSSS
SPOP
0.9712
More...
Q9H4Z2
Zinc finger protein 335
DEG_SPOP_SBC_1
180:184
PMSSS
SPOP
0.5585
More...
Q9ULL8
Protein Shroom4
DEG_SPOP_SBC_1
813:817
PMSSS
SPOP
0.7425
More...
Q9ULT8
E3 ubiquitin-protein ligase HECTD1
DEG_SPOP_SBC_1
1527:1531
PMSSS
SPOP
0.9987
More...
Q9NW07
Zinc finger protein 358
DEG_SPOP_SBC_1
87:91
PMSSS
SPOP
0.9771
More...