DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
PMSSS
Uniprot ID:
Q2KHR2
Source protein:
DNA-binding protein RFX7
Source gene:
RFX7
Class:
DEG_SPOP_SBC_1
Location:
285:289
E3 ligase:
SPOP
DEGRON score:
0.9583
ASA_SCORE:
81.36
COIL:
0.879
CONS_SCORE:
0.446
DSS_SCORE:
0.5521
HELIX:
0.0582
FCONS_SCORE:
0.9723
RIG_SCORE:
0.5956
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P278L
TCGA-L5-A43M
ESCA
TCGA
PMSSS
DEG_SPOP_SBC_1
0.1389
p.Q291E
TCGA-Q9-A6FU
ESCA
TCGA
PMSSS
DEG_SPOP_SBC_1
0.2778
p.S287T
DO224987
BRCA
ICGC
PMSSS
DEG_SPOP_SBC_1
0.6005
p.S288Y
DO52412
UCEC
ICGC
PMSSS
DEG_SPOP_SBC_1
0.712
p.G291D
DO41752
UCEC
ICGC
PMSSS
DEG_SPOP_SBC_1
0.2778
p.G291S
SIDM01954
Colorectal Carcinoma
GDSC
PMSSS
DEG_SPOP_SBC_1
0.2778
p.Q278P
SIDM00202
Ewing's Sarcoma
GDSC
PMSSS
DEG_SPOP_SBC_1
0.1389
p.Q278P
EW-3
bone
COSMIC
PMSSS
DEG_SPOP_SBC_1
0.1389
p.M286V
SIDM01158
Squamous Cell Lung Carcinoma
GDSC
PMSSS
DEG_SPOP_SBC_1
0.6097
p.M286V
SW900
lung
COSMIC
PMSSS
DEG_SPOP_SBC_1
0.6097
p.R275P
ACH-000659
Lung Cancer
CCLE
PMSSS
DEG_SPOP_SBC_1
0.0556
p.R275P
ACH-001386
Lung Cancer
CCLE
PMSSS
DEG_SPOP_SBC_1
0.0556
Drug responses associated with RFX7 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PMSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15062
Zinc finger and BTB domain-containing protein 5
DEG_SPOP_SBC_1
170:174
PMSSS
SPOP
0.8158
More...
P01266
Thyroglobulin
DEG_SPOP_SBC_1
2443:2447
PMSSS
SPOP
0.5138
More...
P39880
Homeobox protein cut-like 1
DEG_SPOP_SBC_1
1060:1064
PMSSS
SPOP
0.9994
More...
Q2KHR2
DNA-binding protein RFX7
DEG_SPOP_SBC_1
285:289
PMSSS
SPOP
0.9583
More...
Q6AWC2
Protein WWC2
DEG_SPOP_SBC_1
569:573
PMSSS
SPOP
0.827
More...
Q6PCT2
F-box/LRR-repeat protein 19
DEG_SPOP_SBC_1
20:24
PMSSS
SPOP
0.8896
More...
Q96JG9
Zinc finger protein 469
DEG_SPOP_SBC_1
610:614
PMSSS
SPOP
0.8719
More...
Q9H0N0
Ras-related protein Rab-6C
DEG_SPOP_SBC_1
211:215
PMSSS
SPOP
0.9712
More...
Q9H4Z2
Zinc finger protein 335
DEG_SPOP_SBC_1
180:184
PMSSS
SPOP
0.5585
More...
Q9ULL8
Protein Shroom4
DEG_SPOP_SBC_1
813:817
PMSSS
SPOP
0.7425
More...
Q9ULT8
E3 ubiquitin-protein ligase HECTD1
DEG_SPOP_SBC_1
1527:1531
PMSSS
SPOP
0.9987
More...
Q9NW07
Zinc finger protein 358
DEG_SPOP_SBC_1
87:91
PMSSS
SPOP
0.9771
More...