DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CPH
CGC
Degron:
PMSSS
Uniprot ID:
Q9ULL8
Source protein:
Protein Shroom4
Source gene:
SHROOM4
Class:
DEG_SPOP_SBC_1
Location:
813:817
E3 ligase:
SPOP
DEGRON score:
0.7425
ASA_SCORE:
83.26
COIL:
0.8812
CONS_SCORE:
0.3493
DSS_SCORE:
0.6653
HELIX:
0.104
FCONS_SCORE:
0.7831
RIG_SCORE:
0.6691
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q809R
TCGA-AA-3984
COAD
TCGA
PMSSS
DEG_SPOP_SBC_1
0.2222
p.Q809R
DO9002
COAD
ICGC
PMSSS
DEG_SPOP_SBC_1
0.2222
p.N810H
TCGA-AP-A1DV
UCEC
TCGA
PMSSS
DEG_SPOP_SBC_1
0.25
p.N810H
DO43186
UCEC
ICGC
PMSSS
DEG_SPOP_SBC_1
0.25
p.R819K
TCGA-B0-4821
KIRC
TCGA
PMSSS
DEG_SPOP_SBC_1
0.2778
p.R819K
DO20131
KIRC
ICGC
PMSSS
DEG_SPOP_SBC_1
0.2778
p.R823C
TCGA-CM-6678
COAD
TCGA
PMSSS
DEG_SPOP_SBC_1
0.1667
p.R823C
DO10220
COAD
ICGC
PMSSS
DEG_SPOP_SBC_1
0.1667
p.P804L
TCGA-DD-A4NF
LIHC
TCGA
PMSSS
DEG_SPOP_SBC_1
0.0833
p.N810T
TCGA-RD-A7C1
STAD
TCGA
PMSSS
DEG_SPOP_SBC_1
0.25
p.N810T
DO50132
STAD
ICGC
PMSSS
DEG_SPOP_SBC_1
0.25
p.R817Q
DO13863
GBM
ICGC
PMSSS
DEG_SPOP_SBC_1
0.7329
p.R817Q
DO42280
UCEC
ICGC
PMSSS
DEG_SPOP_SBC_1
0.7329
p.S815C
DO227931
PBCA
ICGC
PMSSS
DEG_SPOP_SBC_1
0.7541
p.R817W
DO41133
UCEC
ICGC
PMSSS
DEG_SPOP_SBC_1
0.8634
p.I807T
SIDM00247
Gastric Carcinoma
GDSC
PMSSS
DEG_SPOP_SBC_1
0.1667
p.I807T
SIDM01767
Squamous Cell Lung Carcinoma
GDSC
PMSSS
DEG_SPOP_SBC_1
0.1667
p.I807T
ACH-000356
Gastric Cancer
CCLE
PMSSS
DEG_SPOP_SBC_1
0.1667
p.I807T
ACH-000553
Lung Cancer
CCLE
PMSSS
DEG_SPOP_SBC_1
0.1667
p.I807T
ACH-002042
Thyroid Cancer
CCLE
PMSSS
DEG_SPOP_SBC_1
0.1667
p.E820K
SIDM01191
Osteosarcoma
GDSC
PMSSS
DEG_SPOP_SBC_1
0.25
p.E820K
U-2-OS
bone
COSMIC
PMSSS
DEG_SPOP_SBC_1
0.25
Drug responses associated with SHROOM4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PMSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15062
Zinc finger and BTB domain-containing protein 5
DEG_SPOP_SBC_1
170:174
PMSSS
SPOP
0.8158
More...
P01266
Thyroglobulin
DEG_SPOP_SBC_1
2443:2447
PMSSS
SPOP
0.5138
More...
P39880
Homeobox protein cut-like 1
DEG_SPOP_SBC_1
1060:1064
PMSSS
SPOP
0.9994
More...
Q2KHR2
DNA-binding protein RFX7
DEG_SPOP_SBC_1
285:289
PMSSS
SPOP
0.9583
More...
Q6AWC2
Protein WWC2
DEG_SPOP_SBC_1
569:573
PMSSS
SPOP
0.827
More...
Q6PCT2
F-box/LRR-repeat protein 19
DEG_SPOP_SBC_1
20:24
PMSSS
SPOP
0.8896
More...
Q96JG9
Zinc finger protein 469
DEG_SPOP_SBC_1
610:614
PMSSS
SPOP
0.8719
More...
Q9H0N0
Ras-related protein Rab-6C
DEG_SPOP_SBC_1
211:215
PMSSS
SPOP
0.9712
More...
Q9H4Z2
Zinc finger protein 335
DEG_SPOP_SBC_1
180:184
PMSSS
SPOP
0.5585
More...
Q9ULL8
Protein Shroom4
DEG_SPOP_SBC_1
813:817
PMSSS
SPOP
0.7425
More...
Q9ULT8
E3 ubiquitin-protein ligase HECTD1
DEG_SPOP_SBC_1
1527:1531
PMSSS
SPOP
0.9987
More...
Q9NW07
Zinc finger protein 358
DEG_SPOP_SBC_1
87:91
PMSSS
SPOP
0.9771
More...