DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
PMSSS
Uniprot ID:
P39880
Source protein:
Homeobox protein cut-like 1
Source gene:
CUX1
Class:
DEG_SPOP_SBC_1
Location:
1060:1064
E3 ligase:
SPOP
DEGRON score:
0.9994
ASA_SCORE:
71.54
COIL:
0.8318
CONS_SCORE:
0.3515
DSS_SCORE:
0.6221
HELIX:
0.125
FCONS_SCORE:
1.1001
RIG_SCORE:
0.54
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E1055D
TCGA-H6-8124
PAAD
TCGA
PMSSS
DEG_SPOP_SBC_1
0.1944
p.P1071L
TCGA-VQ-A8P2
STAD
TCGA
PMSSS
DEG_SPOP_SBC_1
0.5833
p.P1068S
DO233748
GACA
ICGC
PMSSS
DEG_SPOP_SBC_1
0.3333
p.D1064Y
DO228948
LICA
ICGC
PMSSS
DEG_SPOP_SBC_1
0.7325
p.E1060G
DO24005
LUAD
ICGC
PMSSS
DEG_SPOP_SBC_1
0.7199
p.E1069Q
DO26422
LUSC
ICGC
PMSSS
DEG_SPOP_SBC_1
0.6389
p.P1057S
DO220875
MELA
ICGC
PMSSS
DEG_SPOP_SBC_1
0.25
p.P1055S
DO37409
SKCM
ICGC
PMSSS
DEG_SPOP_SBC_1
0.1944
p.P1057L
DO37408
SKCM
ICGC
PMSSS
DEG_SPOP_SBC_1
0.25
p.S1054L
SIDM01093
Cervical Carcinoma
GDSC
PMSSS
DEG_SPOP_SBC_1
0.6111
p.S1054L
SIDM01061
Oral Cavity Carcinoma
GDSC
PMSSS
DEG_SPOP_SBC_1
0.6111
p.S1054L
SIDM01335
Kidney Carcinoma
GDSC
PMSSS
DEG_SPOP_SBC_1
0.6111
p.S1060N
BE-13
haematopoietic_and_lymphoid_tissue
COSMIC
PMSSS
DEG_SPOP_SBC_1
0.7069
p.K1066E
EN
endometrium
COSMIC
PMSSS
DEG_SPOP_SBC_1
0.2778
p.S1067F
Hs633T
soft_tissue
COSMIC
PMSSS
DEG_SPOP_SBC_1
0.25
p.S1071N
BE-13
haematopoietic_and_lymphoid_tissue
COSMIC
PMSSS
DEG_SPOP_SBC_1
0.5833
Drug responses associated with CUX1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PMSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15062
Zinc finger and BTB domain-containing protein 5
DEG_SPOP_SBC_1
170:174
PMSSS
SPOP
0.8158
More...
P01266
Thyroglobulin
DEG_SPOP_SBC_1
2443:2447
PMSSS
SPOP
0.5138
More...
P39880
Homeobox protein cut-like 1
DEG_SPOP_SBC_1
1060:1064
PMSSS
SPOP
0.9994
More...
Q2KHR2
DNA-binding protein RFX7
DEG_SPOP_SBC_1
285:289
PMSSS
SPOP
0.9583
More...
Q6AWC2
Protein WWC2
DEG_SPOP_SBC_1
569:573
PMSSS
SPOP
0.827
More...
Q6PCT2
F-box/LRR-repeat protein 19
DEG_SPOP_SBC_1
20:24
PMSSS
SPOP
0.8896
More...
Q96JG9
Zinc finger protein 469
DEG_SPOP_SBC_1
610:614
PMSSS
SPOP
0.8719
More...
Q9H0N0
Ras-related protein Rab-6C
DEG_SPOP_SBC_1
211:215
PMSSS
SPOP
0.9712
More...
Q9H4Z2
Zinc finger protein 335
DEG_SPOP_SBC_1
180:184
PMSSS
SPOP
0.5585
More...
Q9ULL8
Protein Shroom4
DEG_SPOP_SBC_1
813:817
PMSSS
SPOP
0.7425
More...
Q9ULT8
E3 ubiquitin-protein ligase HECTD1
DEG_SPOP_SBC_1
1527:1531
PMSSS
SPOP
0.9987
More...
Q9NW07
Zinc finger protein 358
DEG_SPOP_SBC_1
87:91
PMSSS
SPOP
0.9771
More...