DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PTSTS
Uniprot ID:
Q8N5H7
Source protein:
SH2 domain-containing protein 3C
Source gene:
SH2D3C
Class:
DEG_SPOP_SBC_1
Location:
378:382
E3 ligase:
SPOP
DEGRON score:
0.9446
ASA_SCORE:
72.54
COIL:
0.852
CONS_SCORE:
0.455
DSS_SCORE:
0.6616
HELIX:
0.0494
FCONS_SCORE:
1.0178
RIG_SCORE:
0.6562
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D375Y
TCGA-86-6851
LUAD
TCGA
PTSTS
DEG_SPOP_SBC_1
0.25
p.R373C
TCGA-AP-A1DK
UCEC
TCGA
PTSTS
DEG_SPOP_SBC_1
0.1944
p.R373C
SIDM00537
Colorectal Carcinoma
GDSC
PTSTS
DEG_SPOP_SBC_1
0.1944
p.R373C
ACH-000982
Colon/Colorectal Cancer
CCLE
PTSTS
DEG_SPOP_SBC_1
0.1944
p.R373C
ACH-001345
Colon/Colorectal Cancer
CCLE
PTSTS
DEG_SPOP_SBC_1
0.1944
p.R373C
GP5d
large_intestine
COSMIC
PTSTS
DEG_SPOP_SBC_1
0.1944
p.L375I
DO11878
GBM
ICGC
PTSTS
DEG_SPOP_SBC_1
0.25
p.G379D
DO26444
LUSC
ICGC
PTSTS
DEG_SPOP_SBC_1
0.7198
p.G379D
DO41572
UCEC
ICGC
PTSTS
DEG_SPOP_SBC_1
0.7198
p.P374H
DO45431
LUSC
ICGC
PTSTS
DEG_SPOP_SBC_1
0.2222
p.G376R
DO220877
MELA
ICGC
PTSTS
DEG_SPOP_SBC_1
0.2778
p.P385S
DO222363
MELA
ICGC
PTSTS
DEG_SPOP_SBC_1
0.25
p.P385L
DO222683
MELA
ICGC
PTSTS
DEG_SPOP_SBC_1
0.25
p.P385L
DO37417
SKCM
ICGC
PTSTS
DEG_SPOP_SBC_1
0.25
p.G372E
DO37406
SKCM
ICGC
PTSTS
DEG_SPOP_SBC_1
0.1667
p.P370S
DO37432
SKCM
ICGC
PTSTS
DEG_SPOP_SBC_1
0.2222
p.A373V
DO38495
STAD
ICGC
PTSTS
DEG_SPOP_SBC_1
0.1944
p.R373L
SIDM00727
Non-Small Cell Lung Carcinoma
GDSC
PTSTS
DEG_SPOP_SBC_1
0.1944
p.R373L
ACH-000951
Lung Cancer
CCLE
PTSTS
DEG_SPOP_SBC_1
0.1944
p.R373L
NCI-H2342
lung
COSMIC
PTSTS
DEG_SPOP_SBC_1
0.1944
p.E390K
MCC13
skin
COSMIC
PTSTS
DEG_SPOP_SBC_1
0.1111
p.E388K
MCC13
skin
COSMIC
PTSTS
DEG_SPOP_SBC_1
0.1667
p.E369K
SUIT-2
pancreas
COSMIC
PTSTS
DEG_SPOP_SBC_1
0.0833
p.N376K
T98G
central_nervous_system
COSMIC
PTSTS
DEG_SPOP_SBC_1
0.2778
p.V389M
MKN28
stomach
COSMIC
PTSTS
DEG_SPOP_SBC_1
0.1389
p.E370K
SUIT-2
pancreas
COSMIC
PTSTS
DEG_SPOP_SBC_1
0.2222
p.P389T
H513
pleura
COSMIC
PTSTS
DEG_SPOP_SBC_1
0.1389
p.E391K
MCC13
skin
COSMIC
PTSTS
DEG_SPOP_SBC_1
0.0833
p.V387M
MKN28
stomach
COSMIC
PTSTS
DEG_SPOP_SBC_1
0.1944
p.R377C
NMC-G1
central_nervous_system
COSMIC
PTSTS
DEG_SPOP_SBC_1
0.3056
p.V390M
MKN28
stomach
COSMIC
PTSTS
DEG_SPOP_SBC_1
0.1111
Drug responses associated with SH2D3C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35658
Nuclear pore complex protein Nup214
DEG_SPOP_SBC_1
1764:1768
PTSTS
SPOP
0.7279
More...
Q12809
Potassium voltage-gated channel subfamily H member 2
DEG_SPOP_SBC_1
1088:1092
PTSTS
SPOP
0.9344
More...
Q14140
SERTA domain-containing protein 2
DEG_SPOP_SBC_1
181:185
PTSTS
SPOP
0.9991
More...
Q5VT52
Regulation of nuclear pre-mRNA domain-containing protein 2
DEG_SPOP_SBC_1
712:716
PTSTS
SPOP
0.9904
More...
Q659C4
La-related protein 1B
DEG_SPOP_SBC_1
888:892
PTSTS
SPOP
0.9366
More...
Q6ZMT4
Lysine-specific demethylase 7A
DEG_SPOP_SBC_1
725:729
PTSTS
SPOP
0.964
More...
Q70CQ2
Ubiquitin carboxyl-terminal hydrolase 34
DEG_SPOP_SBC_1
3382:3386
PTSTS
SPOP
0.9803
More...
Q8N5H7
SH2 domain-containing protein 3C
DEG_SPOP_SBC_1
378:382
PTSTS
SPOP
0.9446
More...
Q8NEZ4
Histone-lysine N-methyltransferase 2C
DEG_SPOP_SBC_1
1838:1842
PTSTS
SPOP
0.8657
More...
Q92908
Transcription factor GATA-6
DEG_SPOP_SBC_1
516:520
PTSTS
SPOP
0.9952
More...
Q9H4Z2
Zinc finger protein 335
DEG_SPOP_SBC_1
200:204
PTSTS
SPOP
0.9952
More...
Q9Y580
RNA-binding protein 7
DEG_SPOP_SBC_1
109:113
PTSTS
SPOP
0.9723
More...
Q86UB2
Basic immunoglobulin-like variable motif-containing protein
DEG_SPOP_SBC_1
113:117
PTSTS
SPOP
0.996
More...
A8MVS5
Protein HIDE1
DEG_SPOP_SBC_1
211:215
PTSTS
SPOP
0.9885
More...
Q9UHA2
SS18-like protein 2
DEG_SPOP_SBC_1
69:73
PTSTS
SPOP
0.905
More...