DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PTTST
Uniprot ID:
P13611
Source protein:
Versican core protein
Source gene:
VCAN
Class:
DEG_SPOP_SBC_1
Location:
885:889
E3 ligase:
SPOP
DEGRON score:
0.9985
ASA_SCORE:
79.04
COIL:
0.7042
CONS_SCORE:
0.4097
DSS_SCORE:
0.4956
HELIX:
0.0206
FCONS_SCORE:
1.0866
RIG_SCORE:
0.7113
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K878E
TCGA-55-7725
LUAD
TCGA
PTTST
DEG_SPOP_SBC_1
0.25
p.K878E
DO24636
LUAD
ICGC
PTTST
DEG_SPOP_SBC_1
0.25
p.R898G
TCGA-B5-A3FC
UCEC
TCGA
PTTST
DEG_SPOP_SBC_1
0.0833
p.R898G
DO41871
UCEC
ICGC
PTTST
DEG_SPOP_SBC_1
0.0833
p.S888T
TCGA-CC-A7IG
LIHC
TCGA
PTTST
DEG_SPOP_SBC_1
0.6005
p.S888T
DO52179
LIHC
ICGC
PTTST
DEG_SPOP_SBC_1
0.6005
p.S895L
TCGA-CV-A6K2
HNSC
TCGA
PTTST
DEG_SPOP_SBC_1
0.1667
p.S895L
DO52079
HNSC
ICGC
PTTST
DEG_SPOP_SBC_1
0.1667
p.D899Y
TCGA-EO-A22R
UCEC
TCGA
PTTST
DEG_SPOP_SBC_1
0.0556
p.D899Y
DO42713
UCEC
ICGC
PTTST
DEG_SPOP_SBC_1
0.0556
p.A892S
DO229041
LICA
ICGC
PTTST
DEG_SPOP_SBC_1
0.25
p.Q884L
DO23516
LIRI
ICGC
PTTST
DEG_SPOP_SBC_1
0.3056
p.T889I
SIDM00493
Other Solid Cancers
GDSC
PTTST
DEG_SPOP_SBC_1
0.7078
p.S895P
SIDM01140
Ovarian Carcinoma
GDSC
PTTST
DEG_SPOP_SBC_1
0.1667
p.S895P
ACH-001374
Ovarian Cancer
CCLE
PTTST
DEG_SPOP_SBC_1
0.1667
p.S895P
PA-1
ovary
COSMIC
PTTST
DEG_SPOP_SBC_1
0.1667
p.T880A
ACH-000586
Lung Cancer
CCLE
PTTST
DEG_SPOP_SBC_1
0.1944
p.T880A
NCI-H1876
lung
COSMIC
PTTST
DEG_SPOP_SBC_1
0.1944
p.P895Q
NCI-H358
lung
COSMIC
PTTST
DEG_SPOP_SBC_1
0.1667
p.E878G
H3255
lung
COSMIC
PTTST
DEG_SPOP_SBC_1
0.25
p.P885L
COLO-678
large_intestine
COSMIC
PTTST
DEG_SPOP_SBC_1
0.7582
p.H886Q
769-P
kidney
COSMIC
PTTST
DEG_SPOP_SBC_1
0.7582
Drug responses associated with VCAN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P13611
Versican core protein
DEG_SPOP_SBC_1
885:889
PTTST
SPOP
0.9985
More...
P16070
CD44 antigen
DEG_SPOP_SBC_1
527:531
PTTST
SPOP
0.9979
More...
P16150
Leukosialin
DEG_SPOP_SBC_1
234:238
PTTST
SPOP
0.8906
More...
P51532
Transcription activator BRG1
DEG_SPOP_SBC_1
1424:1428
PTTST
SPOP
0.6708
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3128:3132
PTTST
SPOP
0.5488
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3811:3815
PTTST
SPOP
0.6407
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3827:3831
PTTST
SPOP
0.5591
More...
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_SPOP_SBC_1
1621:1625
PTTST
SPOP
0.9682
More...
Q6ZSZ6
Teashirt homolog 1
DEG_SPOP_SBC_1
170:174
PTTST
SPOP
0.7765
More...
Q8IZA0
Dyslexia-associated protein KIAA0319-like protein
DEG_SPOP_SBC_1
422:426
PTTST
SPOP
0.7723
More...
Q8N3K9
Cardiomyopathy-associated protein 5
DEG_SPOP_SBC_1
1097:1101
PTTST
SPOP
0.9044
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12198:12202
PTTST
SPOP
0.9133
More...
Q96GD3
Polycomb protein SCMH1
DEG_SPOP_SBC_1
330:334
PTTST
SPOP
0.7052
More...
Q99607
ETS-related transcription factor Elf-4
DEG_SPOP_SBC_1
375:379
PTTST
SPOP
0.9537
More...
Q99715
Collagen alpha-1
DEG_SPOP_SBC_1
825:829
PTTST
SPOP
0.9873
More...
A6NHQ4
Elongin BC and Polycomb repressive complex 2-associated protein
DEG_SPOP_SBC_1
308:312
PTTST
SPOP
0.9826
More...